RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 RELAQ04206 551 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 ABRQ12979 859 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 NAA25Q14CX7 972 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 KLHL38Q2WGJ6 581 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 BBS9Q3SYG4 887 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 ACSBG2Q5FVE4 666 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 PWWP2BQ6NUJ5 590 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 CNSTQ6PJW8 725 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 PCSK4Q6UW60 755 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 C6orf15Q6UXA7 325 aaPredicted RBP9.5□□□□□ -0.89
NUP98-220ENST00000533346 SLC26A11Q86WA9 606 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 DNAJC22Q8N4W6 341 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 RAB42Q8N4Z0 105 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 OTUD6BQ8N6M0 293 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 IL22RA1Q8N6P7 574 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 LMNTD1Q8N9Z9 388 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 ZSCAN1Q8NBB4 408 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 GSDMBQ8TAX9 411 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 CD200R1Q8TD46 325 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 DENND1AQ8TEH3 1009 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 ASB11Q8WXH4 323 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 PDLIM5Q96HC4 596 aaKnown RBP9.5□□□□□ -0.89
NUP98-220ENST00000533346 PPM1MQ96MI6 270 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 DPH2Q9BQC3 489 aaPredicted RBP9.5□□□□□ -0.89
NUP98-220ENST00000533346 MCMBPQ9BTE3 642 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 GPR87Q9BY21 358 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 ULBP3Q9BZM4 244 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 RAB17Q9H0T7 212 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 CCDC68Q9H2F9 335 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 XKR8Q9H6D3 395 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 LHX9Q9NQ69 397 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 FBXO6Q9NRD1 293 aaPredicted RBP9.5□□□□□ -0.89
NUP98-220ENST00000533346 IARS2Q9NSE4 1012 aaKnown RBP9.5□□□□□ -0.89
NUP98-220ENST00000533346 SPHK1Q9NYA1 384 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 GRHL1Q9NZI5 618 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 IL1RAPL1Q9NZN1 696 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 GALPQ9UBC7 116 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 ZC3H7BQ9UGR2 993 aaKnown RBP9.5□□□□□ -0.89
NUP98-220ENST00000533346 SERTAD3Q9UJW9 196 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 PADI1Q9ULC6 663 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 SNX24Q9Y343 169 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 NFS1Q9Y697 457 aa9.5□□□□□ -0.89
NUP98-220ENST00000533346 HEATR5BQ9P2D3 2071 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 A0A1W2PPV9 198 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 C21orf140B9A014 251 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 KIF2AO00139 706 aaPredicted RBP9.49□□□□□ -0.89
NUP98-220ENST00000533346 SLC16A5O15375 505 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 CPNE3O75131 537 aaKnown RBP9.49□□□□□ -0.89
NUP98-220ENST00000533346 VPS26AO75436 327 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 KIAA0754O94854 1291 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 TIAF1O95411 115 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 GSTA2P09210 222 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 CCNYL3P0C7X3 344 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 ERVK-10P10266 1014 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 LIFP15018 202 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 OAS2P29728 719 aaKnown RBP9.49□□□□□ -0.89
NUP98-220ENST00000533346 RORAP35398 523 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 GCGRP47871 477 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 MPP1Q00013 466 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 MC1RQ01726 317 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 CKAP4Q07065 602 aaKnown RBP9.49□□□□□ -0.89
NUP98-220ENST00000533346 CALCOCO2Q13137 446 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 ARHGAP40Q5TG30 622 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 CDHR3Q6ZTQ4 885 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 LRRC56Q8IYG6 542 aaPredicted RBP9.49□□□□□ -0.89
NUP98-220ENST00000533346 UNC5BQ8IZJ1 945 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 C17orf53Q8N3J3 647 aaPredicted RBP9.49□□□□□ -0.89
NUP98-220ENST00000533346 C19orf47Q8N9M1 422 aaKnown RBP9.49□□□□□ -0.89
NUP98-220ENST00000533346 OR2A1Q8NGT9 310 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 OR9A1PQ8NGU1 263 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 GIMAP7Q8NHV1 300 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 ANKRD7Q92527 254 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 ZNF285Q96NJ3 590 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 CATSPER2Q96P56 530 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 SLC30A3Q99726 388 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 NRTNQ99748 197 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 FANCEQ9HB96 536 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 FAM114A2Q9NRY5 505 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 INTS7Q9NVH2 962 aaKnown RBP9.49□□□□□ -0.89
NUP98-220ENST00000533346 NSMCE4AQ9NXX6 385 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 TAS2R13Q9NYV9 303 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 ANKMY1Q9P2S6 941 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 LNPEPQ9UIQ6 1025 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 KCND3Q9UK17 655 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 SLC39A10Q9ULF5 831 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 TDRKHQ9Y2W6 561 aaKnown RBP9.49□□□□□ -0.89
NUP98-220ENST00000533346 UTP11Q9Y3A2 253 aaKnown RBP9.49□□□□□ -0.89
NUP98-220ENST00000533346 AP1M2Q9Y6Q5 423 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 FLNBO75369 2602 aaKnown RBP9.49□□□□□ -0.89
NUP98-220ENST00000533346 SPTBP11277 2137 aa9.49□□□□□ -0.89
NUP98-220ENST00000533346 FER1L5A0AVI2 2057 aa9.48□□□□□ -0.89
NUP98-220ENST00000533346 ZNF839A8K0R7 811 aa9.48□□□□□ -0.89
NUP98-220ENST00000533346 ZNF891A8MT65 544 aaPredicted RBP9.48□□□□□ -0.89
NUP98-220ENST00000533346 ARHGEF33A8MVX0 844 aa9.48□□□□□ -0.89
NUP98-220ENST00000533346 ISM1B1AKI9 464 aa9.48□□□□□ -0.89
NUP98-220ENST00000533346 AGRPO00253 132 aa9.48□□□□□ -0.89
NUP98-220ENST00000533346 ZBTB14O43829 449 aa9.48□□□□□ -0.89
NUP98-220ENST00000533346 SRPX2O60687 465 aaPredicted RBP9.48□□□□□ -0.89
NUP98-220ENST00000533346 BANF1O75531 89 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms