RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 UCNP55089 124 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 CDKN2DP55273 166 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 ACY1Q03154 408 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 ILF2Q12905 390 aaKnown RBP14.54□□□□□ -0.08
CPSF1-208ENST00000532560 GPS2Q13227 327 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 KCNAB1Q14722 419 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 SLC5A12Q1EHB4 618 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.54□□□□□ -0.08
CPSF1-208ENST00000532560 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.54□□□□□ -0.08
CPSF1-208ENST00000532560 TMTC4Q5T4D3 741 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 BROXQ5VW32 411 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 CYS1Q717R9 158 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 BPHLQ86WA6 291 aaPredicted RBP14.54□□□□□ -0.08
CPSF1-208ENST00000532560 RASGRP3Q8IV61 690 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 PALM2Q8IXS6 379 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 CPNE9Q8IYJ1 553 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 RAB42Q8N4Z0 105 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 LINC01555Q8NAE3 123 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 FBXO15Q8NCQ5 510 aaPredicted RBP14.54□□□□□ -0.08
CPSF1-208ENST00000532560 HMGCLL1Q8TB92 370 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 SLC22A18Q96BI1 424 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 SPRY4Q9C004 299 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 PDE7BQ9NP56 450 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 FAM114A2Q9NRY5 505 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 SOHLH2Q9NX45 425 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 CIDEBQ9UHD4 219 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 TMEM184BQ9Y519 407 aaPredicted RBP14.54□□□□□ -0.08
CPSF1-208ENST00000532560 PSAT1Q9Y617 370 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 A0A0J9YY10 115 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 TCRBV9S1A1TA0A576 114 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 SLC9B1P1A6NJY1 282 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 MYO1CO00159 1063 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 STK17BO94768 372 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 DLGAP3O95886 979 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 CATP04040 527 aaKnown RBP14.53□□□□□ -0.08
CPSF1-208ENST00000532560 ERGP11308 486 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 ST6GAL1P15907 406 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 FDXRP22570 491 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 SSTR1P30872 391 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 CCSMST1Q4G0I0 132 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 HECTD2Q5U5R9 776 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 FAM45BPQ6NSW5 357 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 CAPN12Q6ZSI9 719 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 STRA8Q7Z7C7 330 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 ZC3HC1Q86WB0 502 aaKnown RBP14.53□□□□□ -0.08
CPSF1-208ENST00000532560 CCDC25Q86WR0 208 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 PPP1R3BQ86XI6 285 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 GPATCH11Q8N954 259 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 OR8K5Q8NH50 307 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 FAM45AQ8TCE6 357 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 DENND1AQ8TEH3 1009 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 ASB11Q8WXH4 323 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 CDKL2Q92772 493 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 IL17FQ96PD4 163 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 FCRL4Q96PJ5 515 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 TRAPPC9Q96Q05 1148 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 MCMBPQ9BTE3 642 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 PARD6BQ9BYG5 372 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 CHRNA10Q9GZZ6 450 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 FGF21Q9NSA1 209 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 DMGDHQ9UI17 866 aaKnown RBP14.53□□□□□ -0.08
CPSF1-208ENST00000532560 PILRAQ9UKJ1 303 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 RARRES3Q9UL19 164 aa14.53□□□□□ -0.08
CPSF1-208ENST00000532560 ISM1B1AKI9 464 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 GFYI3L273 518 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 MAP3K7O43318 606 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 SPAG6O75602 509 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 FKBP9O95302 570 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 C1QAP02745 245 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 PVRP15151 417 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 MAGEA4P43358 317 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 RGS4P49798 205 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 ATP1A2P50993 1020 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 GPX6P59796 221 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 SP140Q13342 867 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 MAP7Q14244 749 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 ARHGAP19Q14CB8 494 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 TGIF1Q15583 401 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 CYP2A13Q16696 494 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 CYHR1Q6ZMK1 362 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 CEP128Q6ZU80 1094 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 C3orf62Q6ZUJ4 267 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 PIWIL4Q7Z3Z4 852 aaKnown RBP14.52□□□□□ -0.09
CPSF1-208ENST00000532560 TRIM73Q86UV7 250 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 C19orf47Q8N9M1 422 aaKnown RBP14.52□□□□□ -0.09
CPSF1-208ENST00000532560 OR9A1PQ8NGU1 263 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 OLFM1Q99784 485 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 ULBP3Q9BZM4 244 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 RHOJQ9H4E5 214 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 FANCEQ9HB96 536 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 SYTL2Q9HCH5 934 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 SMYD2Q9NRG4 433 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 LNPEPQ9UIQ6 1025 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 VWA7Q9Y334 891 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 CELSR3Q9NYQ7 3312 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 CACNA1GO43497 2377 aa14.52□□□□□ -0.09
CPSF1-208ENST00000532560 KRT87PA6NCN2 255 aa14.51□□□□□ -0.09
CPSF1-208ENST00000532560 FAM159BA6NKW6 160 aa14.51□□□□□ -0.09
CPSF1-208ENST00000532560 PRICKLE3O43900 615 aaPredicted RBP14.51□□□□□ -0.09
CPSF1-208ENST00000532560 RAD1O60671 282 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms