RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 INSCQ1MX18 579 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 SKIDA1Q1XH10 827 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 LDLRAP1Q5SW96 308 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 CERCAMQ5T4B2 595 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 GPRC6AQ5T6X5 926 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 HES3Q5TGS1 186 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 LETMD1Q6P1Q0 360 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 TTC27Q6P3X3 843 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 CCDC137Q6PK04 289 aaKnown RBP5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 CRTC3Q6UUV7 619 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 SLCO4C1Q6ZQN7 724 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 LCA5Q86VQ0 697 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 MARCH9Q86YJ5 346 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 TRAPPC5Q8IUR0 188 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 SFTPA2Q8IWL1 248 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 DDHD1Q8NEL9 900 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 GPR156Q8NFN8 814 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 OR13C4Q8NGS5 318 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 DCUN1D1Q96GG9 259 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 DNAJC1Q96KC8 554 aaKnown RBP5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 COX4I2Q96KJ9 171 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 KCNJ15Q99712 375 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 NAPGQ99747 312 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 C19orf43Q9BQ61 176 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 CCDC3Q9BQI4 270 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 FAM96AQ9H5X1 160 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 ASB8Q9H765 288 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 SYNDIG1Q9H7V2 258 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 UGT1A7Q9HAW7 530 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 UGT1A10Q9HAW8 530 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 UGT1A8Q9HAW9 530 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 OBP2BQ9NPH6 170 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 EIF2B3Q9NR50 452 aaKnown RBP5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 MRGBPQ9NV56 204 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 NLE1Q9NVX2 485 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 SMOXQ9NWM0 555 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 SMARCAL1Q9NZC9 954 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 KIF17Q9P2E2 1029 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 LRIT1Q9P2V4 623 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 GIMAP2Q9UG22 337 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 CRLS1Q9UJA2 301 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 TMPRSS11EQ9UL52 423 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 SRPK3Q9UPE1 567 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 CLCA2Q9UQC9 943 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 KCNK6Q9Y257 313 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 PCYT1BQ9Y5K3 369 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 SAR1BQ9Y6B6 198 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 SLC30A1Q9Y6M5 507 aa5.67□□□□□ -1.5
HMGB1P42-201ENST00000532126 LAMA1P25391 3075 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 ANKRD36A6QL64 1941 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 A0A1W2PPH5 198 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 CCDC78A2IDD5 438 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 HEATR9A2RTY3 570 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 TRIM64A6NGJ6 449 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 MROH6A6NGR9 719 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 TRIM64BA6NI03 449 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 OR2AG2A6NM03 316 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 C1QTNF9BB2RNN3 333 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 H7C0S8 307 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 M0R082 166 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 GAPDHSO14556 408 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 ZW10O43264 779 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 NUDT21O43809 227 aaKnown RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 PHF2O75151 1096 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 CSO75390 466 aaKnown RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 POP7O75817 140 aaKnown RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 DLGAP3O95886 979 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 KRT14P02533 472 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 RPLP0P05388 317 aaKnown RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 C1QTNF9P0C862 333 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 EPXP11678 715 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 SLC2A4P14672 509 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 BRAFP15056 766 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 PNLIPP16233 465 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 ZNF7P17097 686 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 MSH3P20585 1137 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 CHMP24386 653 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 ADRA1DP25100 572 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 PTX3P26022 381 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 SLC7A1P30825 629 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 MC4RP32245 332 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 COILP38432 576 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 PAFAH1B1P43034 410 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 FNTAP49354 379 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 VPS41P49754 854 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 MAZP56270 477 aaKnown RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 POLE2P56282 527 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 SESN2P58004 480 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 ARF3P61204 181 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 SARNPP82979 210 aaKnown RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 ARF1P84077 181 aaKnown RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 XIAPP98170 497 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 CDK16Q00536 496 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 GPS1Q13098 491 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 CYP1B1Q16678 543 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 KCTD19Q17RG1 926 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 GPR33Q49SQ1 333 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 KHDC1Q4VXA5 237 aaKnown RBP5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 ZRANB3Q5FWF4 1079 aa5.66□□□□□ -1.5
HMGB1P42-201ENST00000532126 FNBP1LQ5T0N5 605 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms