RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 CCDC110Q8TBZ0 833 aa16.67■□□□□ 0.26
PKP3-208ENST00000531857 FAM118BQ9BPY3 351 aa16.67■□□□□ 0.26
PKP3-208ENST00000531857 C19orf43Q9BQ61 176 aa16.67■□□□□ 0.26
PKP3-208ENST00000531857 TBL1YQ9BQ87 522 aa16.67■□□□□ 0.26
PKP3-208ENST00000531857 SLC6A20Q9NP91 592 aa16.67■□□□□ 0.26
PKP3-208ENST00000531857 AGPAT4Q9NRZ5 378 aa16.67■□□□□ 0.26
PKP3-208ENST00000531857 FBXL4Q9UKA2 621 aa16.67■□□□□ 0.26
PKP3-208ENST00000531857 PLAGL1Q9UM63 463 aa16.67■□□□□ 0.26
PKP3-208ENST00000531857 NOVA2Q9UNW9 492 aaKnown RBP16.67■□□□□ 0.26
PKP3-208ENST00000531857 SRPK3Q9UPE1 567 aa16.67■□□□□ 0.26
PKP3-208ENST00000531857 ASF1AQ9Y294 204 aa16.67■□□□□ 0.26
PKP3-208ENST00000531857 TDRKHQ9Y2W6 561 aaKnown RBP16.67■□□□□ 0.26
PKP3-208ENST00000531857 PRSS21Q9Y6M0 314 aa16.67■□□□□ 0.26
PKP3-208ENST00000531857 CSMD1Q96PZ7 3565 aa16.67■□□□□ 0.26
PKP3-208ENST00000531857 A0A0J9YY10 115 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 E2F3O00716 465 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 LRRTM2O43300 516 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 PRF1P14222 555 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 TCP1P17987 556 aaKnown RBP16.66■□□□□ 0.26
PKP3-208ENST00000531857 PEBP1P30086 187 aaKnown RBP16.66■□□□□ 0.26
PKP3-208ENST00000531857 HADHBP55084 474 aaKnown RBP16.66■□□□□ 0.26
PKP3-208ENST00000531857 OTUD4Q01804 1114 aaKnown RBP16.66■□□□□ 0.26
PKP3-208ENST00000531857 AIMP2Q13155 320 aaKnown RBP16.66■□□□□ 0.26
PKP3-208ENST00000531857 PRPSAP1Q14558 356 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 DBN1Q16643 649 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 TLDC1Q6P9B6 456 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 ACTL9Q8TC94 416 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 GRHL3Q8TE85 626 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 WDR77Q9BQA1 342 aaPredicted RBP16.66■□□□□ 0.26
PKP3-208ENST00000531857 ARNT2Q9HBZ2 717 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 ARGLU1Q9NWB6 273 aaPredicted RBP16.66■□□□□ 0.26
PKP3-208ENST00000531857 IRAK4Q9NWZ3 460 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 TFR2Q9UP52 801 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 OSGIN2Q9Y236 505 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 KLHL20Q9Y2M5 609 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 SAR1BQ9Y6B6 198 aa16.66■□□□□ 0.26
PKP3-208ENST00000531857 KCNN4O15554 427 aa16.65■□□□□ 0.26
PKP3-208ENST00000531857 TPH1P17752 444 aa16.65■□□□□ 0.26
PKP3-208ENST00000531857 ALAS2P22557 587 aa16.65■□□□□ 0.26
PKP3-208ENST00000531857 GCGRP47871 477 aa16.65■□□□□ 0.26
PKP3-208ENST00000531857 PRAMEF13Q5VWM6 474 aa16.65■□□□□ 0.26
PKP3-208ENST00000531857 SLC34A3Q8N130 599 aa16.65■□□□□ 0.26
PKP3-208ENST00000531857 PPP4R1Q8TF05 950 aa16.65■□□□□ 0.26
PKP3-208ENST00000531857 ANKRD7Q92527 254 aa16.65■□□□□ 0.26
PKP3-208ENST00000531857 NDC1Q9BTX1 674 aa16.65■□□□□ 0.26
PKP3-208ENST00000531857 NLE1Q9NVX2 485 aaPredicted RBP16.65■□□□□ 0.26
PKP3-208ENST00000531857 SMARCAL1Q9NZC9 954 aa16.65■□□□□ 0.26
PKP3-208ENST00000531857 OR6C2Q9NZP2 312 aa16.65■□□□□ 0.26
PKP3-208ENST00000531857 PLCL2Q9UPR0 1127 aa16.65■□□□□ 0.26
PKP3-208ENST00000531857 ARHGAP10A1A4S6 786 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 ISM1B1AKI9 464 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 BHMG1C9JSJ3 638 aaPredicted RBP16.64■□□□□ 0.25
PKP3-208ENST00000531857 H7C0S8 307 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 SOCS6O14544 535 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 LIN7AO14910 233 aaPredicted RBP16.64■□□□□ 0.25
PKP3-208ENST00000531857 GSTM1P09488 218 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 MMP11P24347 488 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 EIF3EP60228 445 aaKnown RBP16.64■□□□□ 0.25
PKP3-208ENST00000531857 GSTM4Q03013 218 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 CCDC181Q5TID7 509 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 IGFL2Q6UWQ7 119 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 TBC1D21Q8IYX1 336 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 SYCE1Q8N0S2 351 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 LMNTD1Q8N9Z9 388 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 OR5K2Q8NHB8 316 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 DNAJB14Q8TBM8 379 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.64■□□□□ 0.25
PKP3-208ENST00000531857 ELMO1Q92556 727 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 MARVELD3Q96A59 401 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 CDKN2AIPNLQ96HQ2 116 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 SPATA13Q96N96 652 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 EURLQ9NYK6 297 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 POLG2Q9UHN1 485 aa16.64■□□□□ 0.25
PKP3-208ENST00000531857 MYO7BQ6PIF6 2116 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 MACROD2A1Z1Q3 448 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 CCDC78A2IDD5 438 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 CTAGE15A4D2H0 777 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 ZG16O60844 167 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 AP2A2O94973 939 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 CTAGE8P0CG41 777 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 RBP3P10745 1247 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 POU3F2P20265 443 aaPredicted RBP16.63■□□□□ 0.25
PKP3-208ENST00000531857 MAGP20916 626 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 MCM3P25205 808 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 TSFMP43897 325 aaKnown RBP16.63■□□□□ 0.25
PKP3-208ENST00000531857 CACNG1Q06432 222 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 ZRSR2Q15696 482 aaKnown RBP16.63■□□□□ 0.25
PKP3-208ENST00000531857 SLC5A12Q1EHB4 618 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 AGAP7PQ5VUJ5 663 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 DARS2Q6PI48 645 aaKnown RBP16.63■□□□□ 0.25
PKP3-208ENST00000531857 KIRREL2Q6UWL6 708 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 SHISA6Q6ZSJ9 500 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 TTLL10Q6ZVT0 673 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 OVCH1Q7RTY7 1134 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 CTAGE6Q86UF2 777 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 CDKL3Q8IVW4 592 aaPredicted RBP16.63■□□□□ 0.25
PKP3-208ENST00000531857 CTAGE4Q8IX94 777 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 PARP9Q8IXQ6 854 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 KLHDC8BQ8IXV7 354 aa16.63■□□□□ 0.25
PKP3-208ENST00000531857 FAR1Q8WVX9 515 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms