RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-220	ENST00000531733	TMTC1	Q8IUR5	882 aa		20.18	■□□□□ 0.82
FDFT1-220	ENST00000531733	OR13J1	Q8NGT2	312 aa		20.18	■□□□□ 0.82
FDFT1-220	ENST00000531733	IL17F	Q96PD4	163 aa		20.18	■□□□□ 0.82
FDFT1-220	ENST00000531733	PPP1R2P1	Q96PQ5	205 aa		20.18	■□□□□ 0.82
FDFT1-220	ENST00000531733	NDC1	Q9BTX1	674 aa		20.18	■□□□□ 0.82
FDFT1-220	ENST00000531733	LRRC40	Q9H9A6	602 aa		20.18	■□□□□ 0.82
FDFT1-220	ENST00000531733	SLC2A6	Q9UGQ3	507 aa		20.18	■□□□□ 0.82
FDFT1-220	ENST00000531733	NOVA2	Q9UNW9	492 aa	Known RBP	20.18	■□□□□ 0.82
FDFT1-220	ENST00000531733	REXO2	Q9Y3B8	237 aa	Known RBP	20.18	■□□□□ 0.82
FDFT1-220	ENST00000531733	E2F3	O00716	465 aa		20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	TJP3	O95049	919 aa		20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	IGHE	P01854	428 aa		20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	GRIA3	P42263	894 aa		20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	KIR2DS3	Q14952	304 aa		20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	FCRL6	Q6DN72	434 aa		20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	TAX1BP1	Q86VP1	789 aa		20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	MCAT	Q8IVS2	390 aa	Known RBP	20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	CCDC170	Q8IYT3	715 aa		20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	OR52K1	Q8NGK4	314 aa		20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	SPSB2	Q99619	263 aa		20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	LACRT	Q9GZZ8	138 aa		20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	HS3ST3B1	Q9Y662	390 aa		20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	ABCA12	Q86UK0	2595 aa		20.17	■□□□□ 0.82
FDFT1-220	ENST00000531733	TCRBV7S2A1N4T	A0A589	114 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	SOWAHD	A6NJG2	315 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	IPO13	O94829	963 aa	Known RBP	20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	CD63	P08962	238 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	MMP11	P24347	488 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	CCR7	P32248	378 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	AIMP2	Q13155	320 aa	Known RBP	20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	SEMA3A	Q14563	771 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	SPA17	Q15506	151 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	NKG7	Q16617	165 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	PRAMEF13	Q5VWM6	474 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	C1QL3	Q5VWW1	255 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	OVCH1	Q7RTY7	1134 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	KCNMB4	Q86W47	210 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	METTL27	Q8N6F8	245 aa	Predicted RBP	20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	LRRC57	Q8N9N7	239 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	ST6GALNAC3	Q8NDV1	305 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	TM9SF4	Q92544	642 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	WDR77	Q9BQA1	342 aa	Predicted RBP	20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	TSPY26P	Q9H489	355 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	CDC23	Q9UJX2	597 aa		20.16	■□□□□ 0.82
FDFT1-220	ENST00000531733	GRID2IP	A4D2P6	1211 aa		20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733	IQCF5	A8MTL0	148 aa		20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733	RAB28	P51157	221 aa		20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733		Q0VFX4	171 aa		20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733	ELOA	Q14241	798 aa	Known RBP	20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733	KIRREL2	Q6UWL6	708 aa		20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733	IGFL2	Q6UWQ7	119 aa		20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733	SLC22A15	Q8IZD6	547 aa		20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733	HDAC10	Q969S8	669 aa		20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733	ZNF778	Q96MU6	729 aa		20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733	TMEM121	Q9BTD3	319 aa		20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733	SOX17	Q9H6I2	414 aa	Predicted RBP	20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733	CTSF	Q9UBX1	484 aa		20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733	PACSIN2	Q9UNF0	486 aa	Predicted RBP	20.15	■□□□□ 0.82
FDFT1-220	ENST00000531733	DIDO1	Q9BTC0	2240 aa	Known RBP	20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733		A0A1B0GX78	115 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	KRT87P	A6NCN2	255 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	QSOX1	O00391	747 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	MED26	O95402	600 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	ONECUT2	O95948	504 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	GOT2	P00505	430 aa	Known RBP	20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	OR56A5	P0C7T3	313 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	GRIA1	P42261	906 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	OR1D4	P47884	311 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	NAP1L1	P55209	391 aa	Known RBP	20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	HSPA14	Q0VDF9	509 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	ZNF534	Q76KX8	674 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	TICAM1	Q8IUC6	712 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	PARP9	Q8IXQ6	854 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	TTC13	Q8NBP0	860 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	CFAP61	Q8NHU2	1237 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	GRHL3	Q8TE85	626 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	PPP4R1	Q8TF05	950 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	FKBP10	Q96AY3	582 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	LRRC45	Q96CN5	670 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	ALS2CR12	Q96Q35	445 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	CUTC	Q9NTM9	273 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	CNTRL	Q7Z7A1	2325 aa		20.14	■□□□□ 0.81
FDFT1-220	ENST00000531733	LRRTM2	O43300	516 aa		20.13	■□□□□ 0.81
FDFT1-220	ENST00000531733	NRP2	O60462	931 aa		20.13	■□□□□ 0.81
FDFT1-220	ENST00000531733	CD9	P21926	228 aa		20.13	■□□□□ 0.81
FDFT1-220	ENST00000531733	CYLC1	P35663	651 aa	Predicted RBP	20.13	■□□□□ 0.81
FDFT1-220	ENST00000531733	KLF1	Q13351	362 aa	Predicted RBP	20.13	■□□□□ 0.81
FDFT1-220	ENST00000531733	DNAJC21	Q5F1R6	531 aa	Known RBP	20.13	■□□□□ 0.81
FDFT1-220	ENST00000531733	SLC35B2	Q8TB61	432 aa		20.13	■□□□□ 0.81
FDFT1-220	ENST00000531733	DNAJB14	Q8TBM8	379 aa		20.13	■□□□□ 0.81
FDFT1-220	ENST00000531733	DLG3	Q92796	817 aa		20.13	■□□□□ 0.81
FDFT1-220	ENST00000531733	SLC26A1	Q9H2B4	701 aa		20.13	■□□□□ 0.81
FDFT1-220	ENST00000531733	OSGIN2	Q9Y236	505 aa		20.13	■□□□□ 0.81
FDFT1-220	ENST00000531733	EPN1	Q9Y6I3	576 aa	Predicted RBP	20.13	■□□□□ 0.81
FDFT1-220	ENST00000531733	ENO4	A6NNW6	628 aa		20.12	■□□□□ 0.81
FDFT1-220	ENST00000531733	DSCR3	O14972	297 aa		20.12	■□□□□ 0.81
FDFT1-220	ENST00000531733	KLHL41	O60662	606 aa		20.12	■□□□□ 0.81
FDFT1-220	ENST00000531733	GPC4	O75487	556 aa		20.12	■□□□□ 0.81
FDFT1-220	ENST00000531733	PLOD1	Q02809	727 aa	Predicted RBP	20.12	■□□□□ 0.81
FDFT1-220	ENST00000531733	FIGLA	Q6QHK4	219 aa		20.12	■□□□□ 0.81

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms