RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 TCRBV7S3A2A0A539 114 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 C2orf81A6NN90 581 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 ZNF891A8MT65 544 aaPredicted RBP6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 CHUKO15111 745 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 RAD1O60671 282 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 KRT38O76015 456 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 ZNF205O95201 554 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 AP2A1O95782 977 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 PYGLP06737 847 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 CD1CP29017 333 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 SPAM1P38567 509 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 TNNT3P45378 269 aaPredicted RBP6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 CTSCP53634 463 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 POU6F1Q14863 301 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 TRIP13Q15645 432 aaPredicted RBP6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 P3H1Q32P28 736 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 C14orf28Q4W4Y0 310 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 CCDC38Q502W7 563 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 LACTB2Q53H82 288 aaPredicted RBP6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 TTC27Q6P3X3 843 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 DRICH1Q6PGQ1 229 aaPredicted RBP6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 CRTC3Q6UUV7 619 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 C11orf96Q7Z7L8 435 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 ZNF761Q86XN6 746 aaPredicted RBP6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 GALNT13Q8IUC8 556 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 RASGEF1CQ8N431 466 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 RASGEF1AQ8N9B8 481 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 GDAP1Q8TB36 358 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 TMEM159Q96B96 161 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 ZNF778Q96MU6 729 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 VPS35Q96QK1 796 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 OR2M4Q96R27 311 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 TAAR9Q96RI9 348 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 SRPK1Q96SB4 655 aaKnown RBP6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 GSDMCQ9BYG8 508 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 GP6Q9HCN6 339 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 PRDM8Q9NQV8 689 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 KLC4Q9NSK0 619 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 OCIAD1Q9NX40 245 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 NFKBIL1Q9UBC1 381 aaPredicted RBP6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 DNAJC16Q9Y2G8 782 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 PKP3Q9Y446 797 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 OTOGQ6ZRI0 2925 aa6.84□□□□□ -1.31
TRIM53CP-201ENST00000531490 A6NCN8 305 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 MROH6A6NGR9 719 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 OR51F1A6NGY5 319 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 OR2AG2A6NM03 316 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 AGAP14A8MT82 685 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 SGTAO43765 313 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 NUDT21O43809 227 aaKnown RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 SNX2O60749 519 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 SRP72O76094 671 aaKnown RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 CPNE6O95741 557 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 BRAFP15056 766 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 ZNF7P17097 686 aaPredicted RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 POU3F2P20265 443 aaPredicted RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 CSF2RBP32927 897 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 KIR2DL2P43627 348 aaPredicted RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 ZNF140P52738 457 aaPredicted RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 DRG2P55039 364 aaKnown RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 CDC20Q12834 499 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 GPRC6AQ5T6X5 926 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 ANKS6Q68DC2 871 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 PDPK2PQ6A1A2 396 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 CAPRIN2Q6IMN6 1127 aaKnown RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 IYDQ6PHW0 289 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 TMEM220Q6QAJ8 160 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 SYDE1Q6ZW31 735 aaPredicted RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 DET1Q7L5Y6 550 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 TIPARPQ7Z3E1 657 aaKnown RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 PIM3Q86V86 326 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 FAM129CQ86XR2 697 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 PIANPQ8IYJ0 282 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 C17orf53Q8N3J3 647 aaPredicted RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 SFRP1Q8N474 314 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 FBXO15Q8NCQ5 510 aaPredicted RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 BHLHE22Q8NFJ8 381 aaPredicted RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 OR6C4Q8NGE1 309 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 DTX3LQ8TDB6 740 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 CDKN2AIPNLQ96HQ2 116 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 SEC16BQ96JE7 1060 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 PBKQ96KB5 322 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 DNAJC1Q96KC8 554 aaKnown RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 OSBPL9Q96SU4 736 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 FRMD8P1Q9BZ68 369 aaPredicted RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 EPB41L4BQ9H329 900 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 ASB8Q9H765 288 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 LRRC40Q9H9A6 602 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 GPN2Q9H9Y4 310 aaPredicted RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 SLC39A1Q9NY26 324 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 SLC2A6Q9UGQ3 507 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 WDR37Q9Y2I8 494 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 ZNF451Q9Y4E5 1061 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 PCDHGA3Q9Y5H0 932 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 MRPS18BQ9Y676 258 aaKnown RBP6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 CACNA1DQ01668 2161 aa6.83□□□□□ -1.32
TRIM53CP-201ENST00000531490 EFCAB7A8K855 629 aa6.82□□□□□ -1.32
TRIM53CP-201ENST00000531490 RHPN2P1A8MT19 583 aa6.82□□□□□ -1.32
TRIM53CP-201ENST00000531490 KMOO15229 486 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms