RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 LRRC66Q68CR7 880 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 CAPRIN2Q6IMN6 1127 aaKnown RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 LCN8Q6JVE9 175 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 ERAP2Q6P179 960 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 DPY19L3Q6ZPD9 716 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 OTOP2Q7RTS6 562 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 GOLGA7Q7Z5G4 137 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 MILR1Q7Z6M3 343 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 ZFAND4Q86XD8 727 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 DHFR2Q86XF0 187 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 PROSER1Q86XN7 944 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 PTRH1Q86Y79 214 aaKnown RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 TICAM1Q8IUC6 712 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 FUNDC1Q8IVP5 155 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 KLHDC8AQ8IYD2 350 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 ST13P4Q8IZP2 240 aaPredicted RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 MARVELD2Q8N4S9 558 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 TRAM1L1Q8N609 369 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 CELF5Q8N6W0 485 aaKnown RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 DDHD1Q8NEL9 900 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 OR2T34Q8NGX1 318 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 OR2T3Q8NH03 318 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 METTL6Q8TCB7 284 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 MCOLN3Q8TDD5 553 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 MICAL1Q8TDZ2 1067 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 ASZ1Q8WWH4 475 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 STARD8Q92502 1023 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 ATP6V1E2Q96A05 226 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 RHBDF1Q96CC6 855 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 LRRC58Q96CX6 371 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 MOCOSQ96EN8 888 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 ZNF514Q96K75 400 aaPredicted RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 HIST1H2AHQ96KK5 128 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 MARK4Q96L34 752 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 C3orf30Q96M34 536 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 HIST1H2AJQ99878 128 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 EGFL8Q99944 293 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 H2AFJQ9BTM1 129 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 SLC12A9Q9BXP2 914 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 OSBPL6Q9BZF3 934 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 SLC32A1Q9H598 525 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 CXorf56Q9H5V9 222 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 NOL11Q9H8H0 719 aaKnown RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 IPPKQ9H8X2 491 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 PARVBQ9HBI1 364 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 SARS2Q9NP81 518 aaKnown RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 SLC52A3Q9NQ40 469 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 OBP2AQ9NY56 170 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 PLK2Q9NYY3 685 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 WWOXQ9NZC7 414 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 NDUFA13Q9P0J0 144 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 GALPQ9UBC7 116 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 RIMS3Q9UJD0 308 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 ADAMTS6Q9UKP5 1117 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 SNX6Q9UNH7 406 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 ERVW-1Q9UQF0 538 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 EIF3LQ9Y262 564 aaKnown RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 SLC4A7Q9Y6M7 1214 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 PLXNB3Q9ULL4 1909 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 ATP6AP2A0A1C7CYW4 349 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 KLHL33A6NCF5 533 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 PRORSD1PA6NEY8 169 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 NEDD8-MDP1E9PL57 170 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 GFYI3L273 518 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 FXYD1O00168 92 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 LSM1O15116 133 aaKnown RBP5.43□□□□□ -1.54
PCF11-205ENST00000530906 TMPRSS2O15393 492 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 CCL16O15467 120 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 ULK1O75385 1050 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 TULP3O75386 442 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 MOSPD3O75425 235 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 ATP6AP2O75787 350 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 RSL1D1O76021 490 aaKnown RBP5.43□□□□□ -1.54
PCF11-205ENST00000530906 SLCO2B1O94956 709 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 OR4F21O95013 312 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 TRIM16O95361 564 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 CLDN9O95484 217 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 PRAMEF12O95522 483 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 NFATC1O95644 943 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 IL6P05231 212 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 UGT2B4P06133 528 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 CAPN1P07384 714 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 SPATA31D3P0C874 917 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 PRPS2P11908 318 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 HSD3B1P14060 373 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 ATP1B2P14415 290 aaPredicted RBP5.43□□□□□ -1.54
PCF11-205ENST00000530906 TSPAN8P19075 237 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 CAPN3P20807 821 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 IL10P22301 178 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 XPAP23025 273 aaPredicted RBP5.43□□□□□ -1.54
PCF11-205ENST00000530906 SLC6A2P23975 617 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 PSMA4P25789 261 aaKnown RBP5.43□□□□□ -1.54
PCF11-205ENST00000530906 ITGB8P26012 769 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 HSD3B2P26439 372 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 PEX2P28328 305 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 HTR1EP28566 365 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 AKT1P31749 480 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 DPP6P42658 865 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 GNPDA1P46926 289 aa5.43□□□□□ -1.54
PCF11-205ENST00000530906 AGTR2P50052 363 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms