RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 FAM8A1Q9UBU6 413 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 CD300AQ9UGN4 299 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 EGFL7Q9UHF1 273 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 GPR45Q9Y5Y3 372 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 MTX2O75431 263 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 RHOP08100 348 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 TYRP14679 529 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 DGKAP23743 735 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 CAPGP40121 348 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 CDC20Q12834 499 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 PLA2G4EQ3MJ16 856 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 CARD16Q5EG05 197 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 LY6G5CQ5SRR4 150 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 TPRG1Q6ZUI0 275 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 AKAP14Q86UN6 197 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 IFNEQ86WN2 208 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 DHFR2Q86XF0 187 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 GOLM1Q8NBJ4 401 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 SCRN2Q96FV2 425 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 LMLNQ96KR4 655 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 C1QTNF3Q9BXJ4 246 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 NUSAP1Q9BXS6 441 aaKnown RBP11.29□□□□□ -0.6
USP35-207ENST00000530546 BRD9Q9H8M2 597 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 CPNE5Q9HCH3 593 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 CCM2LQ9NUG4 571 aaPredicted RBP11.29□□□□□ -0.6
USP35-207ENST00000530546 TDP1Q9NUW8 608 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 B4GALT6Q9UBX8 382 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 ST14Q9Y5Y6 855 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 OR7A17O14581 309 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 VPS4BO75351 444 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 RASAL1O95294 804 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 CHRNB1P11230 501 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 RPS3P23396 243 aaKnown RBP eCLIP11.29□□□□□ -0.6
USP35-207ENST00000530546 KRT6CP48668 564 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 KCNK10P57789 538 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 PLIN5Q00G26 463 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 PTSQ03393 145 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 NR6A1Q15406 480 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 ATP6AP1Q15904 470 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 C6orf10Q5SRN2 563 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 NECAB2Q7Z6G3 386 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 MILR1Q7Z6M3 343 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 HEATR4Q86WZ0 1026 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 ZNF366Q8N895 744 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 DNAJB14Q8TBM8 379 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 CYGBQ8WWM9 190 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 ERLEC1Q96DZ1 483 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 ZNF486Q96H40 463 aaPredicted RBP11.29□□□□□ -0.6
USP35-207ENST00000530546 ZNF382Q96SR6 550 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 TMEM181Q9P2C4 612 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 INSL6Q9Y581 213 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 OBSL1O75147 1896 aa11.29□□□□□ -0.6
USP35-207ENST00000530546 SAC3D1A6NKF1 404 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 PSMD11O00231 422 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 NME4O00746 187 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 TAPBPO15533 448 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 DEAF1O75398 565 aaPredicted RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 MOSPD3O75425 235 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 EPCAMP16422 314 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 IRS1P35568 1242 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 NFYCQ13952 458 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 ARHGEF7Q14155 803 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 ATP6AP1LQ52LC2 224 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 C6orf136Q5SQH8 315 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 TMTC4Q5T4D3 741 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 BROXQ5VW32 411 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 GTF2IRD2BQ6EKJ0 949 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 EFL1Q7Z2Z2 1120 aaKnown RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 SPATA19Q7Z5L4 167 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 GTF2IRD2Q86UP8 949 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 ZBTB46Q86UZ6 589 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 EPHX4Q8IUS5 362 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 DHRSXQ8N5I4 330 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 MRPL43Q8N983 215 aaKnown RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 SNX19Q92543 992 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 BADQ92934 168 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 IRF7Q92985 503 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 ZUFSPQ96AP4 578 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 VOPP1Q96AW1 172 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 PDLIM5Q96HC4 596 aaKnown RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 ZSWIM3Q96MP5 696 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 COPS8Q99627 209 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 TRIM15Q9C019 465 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 PIF1Q9H611 641 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 FANCEQ9HB96 536 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 AGPAT4Q9NRZ5 378 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 AIG1Q9NVV5 245 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 MBD1Q9UIS9 605 aaPredicted RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 HS3ST2Q9Y278 367 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 LTBP2Q14767 1821 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 TRBV5-4A0A0C4DH59 114 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 RNF103-CHMP3A0A140T963 221 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 CARNS1A5YM72 827 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 PER2O15055 1255 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 TLL1O43897 1013 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 SERPINB1P30740 379 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 AKT1P31749 480 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 HSPA14Q0VDF9 509 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 AAK1Q2M2I8 961 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 INAVAQ3KP66 663 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms