RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PIWIL4Q7Z3Z4 852 aaKnown RBP4.28□□□□□ -1.72
C11orf88-204ENST00000529661 IQCA1Q86XH1 822 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 ARHGAP24Q8N264 748 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 ZNF713Q8N859 430 aaPredicted RBP4.28□□□□□ -1.72
C11orf88-204ENST00000529661 LRRC8CQ8TDW0 803 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 MOB3AQ96BX8 217 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 OXNAD1Q96HP4 312 aaPredicted RBP4.28□□□□□ -1.72
C11orf88-204ENST00000529661 SGK494Q96LW2 274 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 INTS14Q96SY0 518 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 MLPHQ9BV36 600 aaPredicted RBP4.28□□□□□ -1.72
C11orf88-204ENST00000529661 VN1R1Q9GZP7 353 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 MMP28Q9H239 520 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 ARRDC1-AS1Q9H2J1 176 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 CDH20Q9HBT6 801 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 ZFP57Q9NU63 452 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 DDX43Q9NXZ2 648 aaKnown RBP4.28□□□□□ -1.72
C11orf88-204ENST00000529661 FAM172BPA6NC97 362 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 PRR23AA6NEV1 266 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 C5orf52A6NGY3 159 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 H0YAE9 185 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 P2RY10O00398 339 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 CAPN9O14815 690 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 SLC30A4O14863 429 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 FGF17O60258 216 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 RNASEH1O60930 286 aaKnown RBP4.27□□□□□ -1.73
C11orf88-204ENST00000529661 PDE9AO76083 593 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 ACP2P11117 423 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 AZGP1P25311 298 aaKnown RBP4.27□□□□□ -1.73
C11orf88-204ENST00000529661 FMO5P49326 533 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 YWHAHQ04917 246 aaPredicted RBP4.27□□□□□ -1.73
C11orf88-204ENST00000529661 ITGA7Q13683 1181 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 PTK6Q13882 451 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 UGCGQ16739 394 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 TYSND1Q2T9J0 566 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 NHSL2Q5HYW2 709 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 SHEQ5VZ18 495 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 IYDQ6PHW0 289 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 LINC00696Q6ZRV3 163 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 SLC26A9Q7LBE3 791 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 NUP54Q7Z3B4 507 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 FAM219AQ8IW50 185 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 FAM114A1Q8IWE2 563 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 CNPY4Q8N129 248 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 CRYBG2Q8N1P7 616 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 ANKRD13CQ8N6S4 541 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 DMBX1Q8NFW5 382 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 FGFBP3Q8TAT2 258 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 AFAP1L1Q8TED9 768 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 SYN2Q92777 582 aaPredicted RBP4.27□□□□□ -1.73
C11orf88-204ENST00000529661 LINGO1Q96FE5 620 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 PARK7Q99497 189 aaKnown RBP4.27□□□□□ -1.73
C11orf88-204ENST00000529661 INPP5KQ9BT40 448 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 FN3KQ9H479 309 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 DNAJC4Q9NNZ3 241 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 TAAR2Q9P1P5 351 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 CDH7Q9ULB5 785 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 LIPT1Q9Y234 373 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 KCNK7Q9Y2U2 307 aa4.27□□□□□ -1.73
C11orf88-204ENST00000529661 PCDH11YQ9BZA8 1340 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 A0A0U1RQK1 487 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 A0A1W2PPK0 400 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 ZNF320A2RRD8 509 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 FAM86B1E9PN63 330 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 SYNGR3O43761 229 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 FMO6PO60774 539 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 SLC22A3O75751 556 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 GAS8-AS1O95177 125 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 BAG4O95429 457 aaKnown RBP4.26□□□□□ -1.73
C11orf88-204ENST00000529661 VIMP08670 466 aaKnown RBP4.26□□□□□ -1.73
C11orf88-204ENST00000529661 FAM86B2P0C5J1 330 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 GNAZP19086 355 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 ACAT1P24752 427 aaKnown RBP4.26□□□□□ -1.73
C11orf88-204ENST00000529661 TIA1P31483 386 aaKnown RBP eCLIP4.26□□□□□ -1.73
C11orf88-204ENST00000529661 PTGER4P35408 488 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 PTENP60484 403 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 GAGE5Q13069 117 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 GAGE6Q13070 117 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 NFE2L1Q14494 772 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 CDC37Q16543 378 aaPredicted RBP4.26□□□□□ -1.73
C11orf88-204ENST00000529661 STXBP5Q5T5C0 1151 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 SLC27A1Q6PCB7 646 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 GSG1LQ6UXU4 331 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 C15orf39Q6ZRI6 1047 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 LONP2Q86WA8 852 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 NUDT13Q86X67 352 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 CIARTQ8N365 385 aaPredicted RBP4.26□□□□□ -1.73
C11orf88-204ENST00000529661 TMCO5AQ8N6Q1 288 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 TRIML1Q8N9V2 468 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 THAP8Q8NA92 274 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 NPEPL1Q8NDH3 523 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 OR13J1Q8NGT2 312 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 FIBINQ8TAL6 211 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 NSMAFQ92636 917 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 RAD54LQ92698 747 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 C17orf77Q96MU5 243 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 ZNF583Q96ND8 569 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 LRRC1Q9BTT6 524 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 POLR3CQ9BUI4 534 aaPredicted RBP4.26□□□□□ -1.73
C11orf88-204ENST00000529661 FUT8Q9BYC5 575 aa4.26□□□□□ -1.73
C11orf88-204ENST00000529661 DNAI2Q9GZS0 605 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms