RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 SSX4O60224 188 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 OTCP00480 354 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 PKMP14618 531 aaKnown RBP14.33□□□□□ -0.12
CAPN1-214ENST00000528165 RACK1P63244 317 aaKnown RBP14.33□□□□□ -0.12
CAPN1-214ENST00000528165 RPP38P78345 283 aaKnown RBP14.33□□□□□ -0.12
CAPN1-214ENST00000528165 GTF2H2Q13888 395 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 C18orf21Q32NC0 220 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-214ENST00000528165 SMUG1Q53HV7 270 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 GTF2H2CQ6P1K8 395 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-214ENST00000528165 CCDC71Q8IV32 467 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-214ENST00000528165 GALNT12Q8IXK2 581 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 TTC16Q8NEE8 873 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 OR4K2Q8NGD2 314 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 C1orf74Q96LT6 269 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 SARS2Q9NP81 518 aaKnown RBP14.33□□□□□ -0.12
CAPN1-214ENST00000528165 NLE1Q9NVX2 485 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-214ENST00000528165 NUDT4Q9NZJ9 180 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 SNX6Q9UNH7 406 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 TNPO3Q9Y5L0 923 aaKnown RBP14.33□□□□□ -0.12
CAPN1-214ENST00000528165 PAPPA2Q9BXP8 1791 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 A0A096LPI6 279 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 LOC110117498-PIK3R3F6TDL0 507 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 hCG_2039718K7EN88 272 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 DIRAS1O95057 198 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 ALX3O95076 343 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 EPOP01588 193 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 C21orf33P30042 268 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-214ENST00000528165 PBX3P40426 434 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 SLC15A1P46059 708 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 CHRNEQ04844 493 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 ZNF235Q14590 738 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 TBCEQ15813 527 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-214ENST00000528165 ALFQ53S48 1182 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 C10orf111Q8N326 155 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 C3orf58Q8NDZ4 430 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 PIK3R3Q92569 461 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 SERPINB11Q96P15 392 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 CPPED1Q9BRF8 314 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-214ENST00000528165 IPPKQ9H8X2 491 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 IL1RAPQ9NPH3 570 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 TMEM248Q9NWD8 314 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 ADPRHL2Q9NX46 363 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 AGO1Q9UL18 857 aaKnown RBP14.32□□□□□ -0.12
CAPN1-214ENST00000528165 BTBD3Q9Y2F9 522 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 SAMHD1Q9Y3Z3 626 aaKnown RBP14.32□□□□□ -0.12
CAPN1-214ENST00000528165 SPO11Q9Y5K1 396 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 E5RI56 91 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 ERN1O75460 977 aaKnown RBP14.32□□□□□ -0.12
CAPN1-214ENST00000528165 DNTTP04053 509 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 SMIM10L2AP0DMW4 78 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 SMIM10L2BP0DMW5 78 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 PRKCAP17252 672 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 TSPY1Q01534 308 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 ZCCHC8Q6NZY4 707 aaKnown RBP14.32□□□□□ -0.12
CAPN1-214ENST00000528165 SLC46A3Q7Z3Q1 461 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 TMEM132CQ8N3T6 1108 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 OR6J1Q8NGC5 347 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 CD200R1Q8TD46 325 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 APH1BQ8WW43 257 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 MYDGFQ969H8 173 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 TMEM246Q9BRR3 403 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 CLMPQ9H6B4 373 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 C14orf119Q9NWQ9 140 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 HECAQ9UBI9 543 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-214ENST00000528165 VPS9D1Q9Y2B5 631 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 CCL27Q9Y4X3 112 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 LYVE1Q9Y5Y7 322 aa14.32□□□□□ -0.12
CAPN1-214ENST00000528165 COL4A4P53420 1690 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-214ENST00000528165 TRBV5-3A0A0A0MS03 114 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 FFAR3O14843 346 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 MUSKO15146 869 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 GPR42O15529 346 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 CCNDBP1O95273 360 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 SOX6P35712 828 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 CDKN1CP49918 316 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-214ENST00000528165 GZMMP51124 257 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 IL10RBQ08334 325 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 NPRL3Q12980 569 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 PCBP2Q15366 365 aaKnown RBP eCLIP14.31□□□□□ -0.122e-6■□□□□ 10.5
CAPN1-214ENST00000528165 ENTHD1Q8IYW4 607 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 SIMC1Q8NDZ2 872 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 CLHC1Q8NHS4 586 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 CEP19Q96LK0 163 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 Q96MT0 163 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 RNF167Q9H6Y7 350 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 ELP3Q9H9T3 547 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 TMLHEQ9NVH6 421 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 PIM2Q9P1W9 311 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 TSR3Q9UJK0 312 aaKnown RBP14.31□□□□□ -0.12
CAPN1-214ENST00000528165 MEIS3P2A8K0S8 358 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 OR1I1O60431 355 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 FABP3P05413 133 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 HOXD11P31277 338 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-214ENST00000528165 CA8P35219 290 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 PIK3CGP48736 1102 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 ZNF140P52738 457 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-214ENST00000528165 HMGCS1Q01581 520 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 STARD3Q14849 445 aa14.31□□□□□ -0.12
CAPN1-214ENST00000528165 CCDC58Q4VC31 144 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms