RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 CEACAM1P13688 526 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 MTHFD2P13995 350 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 CREB1P16220 341 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 SDHBP21912 280 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 CD1CP29017 333 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 IMPA1P29218 277 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 HNMTP50135 292 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 CLPPQ16740 277 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-205ENST00000526954 CCDC153Q494R4 210 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 N4BP2L1Q5TBK1 243 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-205ENST00000526954 LRRC56Q8IYG6 542 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-205ENST00000526954 ADGRF3Q8IZF5 1079 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 PDPRQ8NCN5 879 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 OR10G6Q8NH81 332 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 ZNF480Q8WV37 535 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 ATL1Q8WXF7 558 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 JPH3Q8WXH2 748 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-205ENST00000526954 ARL8AQ96BM9 186 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 SCYL1Q96KG9 808 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 IL17FQ96PD4 163 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 NRTNQ99748 197 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 RAB33BQ9H082 229 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 XKR8Q9H6D3 395 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 TOR4AQ9NXH8 423 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 OGFRQ9NZT2 677 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 STOX2Q9P2F5 926 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-205ENST00000526954 XPR1Q9UBH6 696 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 CIDEBQ9UHD4 219 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 EMCNQ9ULC0 261 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 TMCO1Q9UM00 188 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 PLLPQ9Y342 182 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 OR5K3A6NET4 321 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 E7ENX8 843 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 TK2O00142 265 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 GUCA1CO95843 209 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 PROCP04070 461 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 PROS1P07225 676 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 CDK4P11802 303 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 GGT5P36269 586 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 CAPZBP47756 277 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 PNLIPRP1P54315 467 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 TAP2Q03519 686 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 SULT1C3Q6IMI6 304 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 C16orf46Q6P387 395 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 AGTRAPQ6RW13 159 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 MBOAT1Q6ZNC8 495 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 OOSP2Q86WS3 158 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 TCAIMQ8N3R3 496 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 Q8N9G6 341 aaPredicted RBP16■□□□□ 0.15
CAPN1-205ENST00000526954 LINC01555Q8NAE3 123 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 WDR48Q8TAF3 677 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 RHBDF1Q96CC6 855 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 ATP6V1G3Q96LB4 118 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 LRRN3Q9H3W5 708 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 CD274Q9NZQ7 290 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 EPHA6Q9UF33 1036 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 PTBP2Q9UKA9 531 aaKnown RBP16■□□□□ 0.15
CAPN1-205ENST00000526954 ENTPD2Q9Y5L3 495 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 DMXL1Q9Y485 3027 aa16■□□□□ 0.15
CAPN1-205ENST00000526954 A0A1W2PQM1 296 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 OR6C74A6NCV1 312 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 SUPT3HB4E1H0 165 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 UBXN8O00124 270 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 MATN2O00339 956 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 BTN3A3O00478 584 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 NTN3O00634 580 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-205ENST00000526954 PRPF4O43172 522 aaKnown RBP eCLIP15.99■□□□□ 0.153e-6■■■□□ 16.4
CAPN1-205ENST00000526954 DUX1O43812 170 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 PLIN3O60664 434 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 SPAG7O75391 227 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 SUPT3HO75486 399 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 RFPL3O75679 317 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 DKK1O94907 266 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 CHRM5P08912 532 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-205ENST00000526954 TYRP1P17643 537 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 AMD1P17707 334 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 MAGOHP61326 146 aaKnown RBP15.99■□□□□ 0.15
CAPN1-205ENST00000526954 CCL7P80098 99 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 E2F1Q01094 437 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 RSPO4Q2I0M5 234 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-205ENST00000526954 ZXDCQ2QGD7 858 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-205ENST00000526954 WDR74Q6RFH5 385 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-205ENST00000526954 ALYREFQ86V81 257 aaKnown RBP15.99■□□□□ 0.15
CAPN1-205ENST00000526954 KLHDC8AQ8IYD2 350 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 SYTL1Q8IYJ3 562 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 GOLGA6L1Q8N7Z2 621 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 SMPDL3AQ92484 453 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 RSC1A1Q92681 617 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 AHCYL2Q96HN2 611 aaKnown RBP15.99■□□□□ 0.15
CAPN1-205ENST00000526954 EGFL8Q99944 293 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 DPYSL5Q9BPU6 564 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 RTKNQ9BST9 563 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 IQCGQ9H095 443 aaKnown RBP15.99■□□□□ 0.15
CAPN1-205ENST00000526954 HRASLS2Q9NWW9 162 aa15.99■□□□□ 0.15
CAPN1-205ENST00000526954 NCF1BA6NI72 391 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-205ENST00000526954 NCF1CA8MVU1 366 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-205ENST00000526954 HMGB1P1B2RPK0 211 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-205ENST00000526954 TAPBPO15533 448 aa15.98■□□□□ 0.15
CAPN1-205ENST00000526954 PRICKLE3O43900 615 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-205ENST00000526954 S100BP04271 92 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms