RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 KYAT3Q6YP21 454 aaKnown RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 MTSS1LQ765P7 747 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 C1QL2Q7Z5L3 287 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 TBC1D1Q86TI0 1168 aaPredicted RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 PSTKQ8IV42 348 aaKnown RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 MAP7D3Q8IWC1 876 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 NRSN1Q8IZ57 195 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 CCDC185Q8N715 623 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 ZNF527Q8NB42 609 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 DENND1AQ8TEH3 1009 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 TEKT4Q8WW24 435 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 SUSD6Q92537 303 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 HSPH1Q92598 858 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 NTAN1Q96AB6 310 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 ELSPBP1Q96BH3 223 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 TMA16Q96EY4 203 aaKnown RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 P2RY11Q96G91 374 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 HES6Q96HZ4 224 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 TBATAQ96M53 351 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 ZNF778Q96MU6 729 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 SIGLEC11Q96RL6 698 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 MYADMQ96S97 322 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 PRPF18Q99633 342 aaKnown RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 PHF7Q9BWX1 381 aaPredicted RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 RAB6CQ9H0N0 254 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 GOLPH3Q9H4A6 298 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 CDCP1Q9H5V8 836 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 KIF9Q9HAQ2 790 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 TRPV4Q9HBA0 871 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 SMYD2Q9NRG4 433 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 TUBA8Q9NY65 449 aaPredicted RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 TBC1D14Q9P2M4 693 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 RNF7Q9UBF6 113 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 OR12D3Q9UGF7 316 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 AGO1Q9UL18 857 aaKnown RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 FZD10Q9ULW2 581 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 CCL26Q9Y258 94 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 UBE2J1Q9Y385 318 aaPredicted RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 LAMA2P24043 3122 aaKnown RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 NUP210Q8TEM1 1887 aaPredicted RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 HELZP42694 1942 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 GXYLT2A0PJZ3 443 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 TTC36A6NLP5 189 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 HEPACAM2A8MVW5 462 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 E9PAM4 449 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 F5H5T6 163 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 PRYO14603 147 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 RRHO14718 337 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 TSPAN3O60637 253 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 ATP1A1P05023 1023 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 PSMC3P17980 439 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 NDUFS1P28331 727 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 OAS2P29728 719 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 CTNNA1P35221 906 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 GJC1P36383 396 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 HCAR3P49019 387 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 AGTR2P50052 363 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 DNA2P51530 1060 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 ARSEP51690 589 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 CDH6P55285 790 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 YPEL5P62699 121 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 SLC25A11Q02978 314 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 SPARCL1Q14515 664 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 CA9Q16790 459 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 SMTNL2Q2TAL5 461 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 MPPE1Q53F39 396 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 GLE1Q53GS7 698 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 FAM133BQ5BKY9 247 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 PPP6R3Q5H9R7 873 aaPredicted RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 MS4A13Q5J8X5 152 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 DNTTIP2Q5QJE6 756 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 OTUD1Q5VV17 481 aaPredicted RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 PAPD7Q5XG87 772 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 TXNRD3NBQ6F5E7 133 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 C11orf87Q6NUJ2 197 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 PARM1Q6UWI2 310 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 SNX32Q86XE0 403 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 GATAD2AQ86YP4 633 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 CCDC50Q8IVM0 306 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 CCDC117Q8IWD4 279 aaPredicted RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 MFSD6LQ8IWD5 586 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 BBS7Q8IWZ6 715 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 UEVLDQ8IX04 471 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 KATNAL2Q8IYT4 538 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 LGI2Q8N0V4 545 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 PYROXD2Q8N2H3 581 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 CPXM2Q8N436 756 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 EXD1Q8NHP7 514 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 KIF18AQ8NI77 898 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 FAM71BQ8TC56 605 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 CCT6BQ92526 530 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 RAPGEF5Q92565 580 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 KRT35Q92764 455 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 CD101Q93033 1021 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 WBP2Q969T9 261 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 OTUB2Q96DC9 234 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 ZNF845Q96IR2 970 aaPredicted RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 RBM41Q96IZ5 413 aaKnown RBP4.49□□□□□ -1.69
USP48-211ENST00000526044 FAR2Q96K12 515 aa4.49□□□□□ -1.69
USP48-211ENST00000526044 RPGRIP1Q96KN7 1286 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms