RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 TMEM79Q9BSE2 394 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 DERL2Q9GZP9 239 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 KLHL25Q9H0H3 589 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 TSPAN10Q9H1Z9 355 aaPredicted RBP6.29□□□□□ -1.4
CD44-214ENST00000525211 ALG9Q9H6U8 611 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 KIR3DX1Q9H7L2 352 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 RDH14Q9HBH5 336 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 DLL3Q9NYJ7 618 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 TXNDC16Q9P2K2 825 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 FETUBQ9UGM5 382 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 HRH3Q9Y5N1 445 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 COMMD10Q9Y6G5 202 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 SPTBN2O15020 2390 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 SNRNP200O75643 2136 aaKnown RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 COL5A1P20908 1838 aaPredicted RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 UNC13CQ8NB66 2214 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 IGHV1OR21-1A0A087WYE8 117 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 KIR2DS5A0A0G2JLQ3 304 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 A0A0G2JNG1 304 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 A0A1B0GTL3 188 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 OR6C74A6NCV1 312 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 NCF1BA6NI72 391 aaPredicted RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 A6NJY4 79 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 NCF1CA8MVU1 366 aaPredicted RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 H3BQF6 201 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 KIR2DS3K7RE56 304 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 MYO1CO00159 1063 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 PPP6CO00743 305 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 YKT6O15498 198 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 HYAL3O43820 417 aaPredicted RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 KCNJ13O60928 360 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 ERLIN1O75477 346 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 KLHL2O95198 593 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 SIX3O95343 332 aaPredicted RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 GUCA1CO95843 209 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 SLC16A8O95907 504 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 VIPP01282 170 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 MT-ND3P03897 115 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 PROCP04070 461 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 TUBBP07437 444 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 GSTM1P09488 218 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 LTA4HP09960 611 aaKnown RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 CBSLP0DN79 551 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 ERGP11308 486 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 NCF1P14598 390 aaPredicted RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 GLB1P16278 677 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 CKMT2P17540 419 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 VCLP18206 1134 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 EPORP19235 508 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 POLR2CP19387 275 aaPredicted RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 ACP1P24666 158 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 IMPA1P29218 277 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 CRABP2P29373 138 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 ALDH4A1P30038 563 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 ATP5DP30049 168 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 PKLRP30613 574 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 CBSP35520 551 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 SKIV2L2P42285 1042 aaKnown RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 MAPK9P45984 424 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 FASLGP48023 281 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 KPNA2P52292 529 aaKnown RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 INSM1Q01101 510 aaPredicted RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 GSTM4Q03013 218 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 IFFO1Q0D2I5 559 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 SLC14A1Q13336 389 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 KIR2DS5Q14953 304 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 NR1D2Q14995 579 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 ZIC1Q15915 447 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 AMZ1Q400G9 498 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 MAP9Q49MG5 647 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 TBCELQ5QJ74 424 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 LRRC8EQ6NSJ5 796 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 UGT3A1Q6NUS8 523 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 DHRS13Q6UX07 377 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 NEK10Q6ZWH5 1172 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 SRRM1Q8IYB3 904 aaKnown RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 TBC1D21Q8IYX1 336 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 SHISA5Q8N114 240 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 BANPQ8N9N5 519 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 ZNF480Q8WV37 535 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 SKA2Q8WVK7 121 aaPredicted RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 HPS1Q92902 700 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 KIAA1191Q96A73 305 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 PYCR2Q96C36 320 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 NSUN5Q96P11 429 aaKnown RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 OR4K3Q96R72 315 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 SH3GL2Q99962 352 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 CCDC3Q9BQI4 270 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 SLC12A9Q9BXP2 914 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 PITPNM3Q9BZ71 974 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 ROPN1BQ9BZX4 212 aaPredicted RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 ATG10Q9H0Y0 220 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 ABCG4Q9H172 646 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 SEMA6CQ9H3T2 930 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 ROPN1Q9HAT0 212 aaPredicted RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 POPDC3Q9HBV1 291 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 STOX2Q9P2F5 926 aaPredicted RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 CPSF2Q9P2I0 782 aaKnown RBP6.28□□□□□ -1.4
CD44-214ENST00000525211 FTSJ1Q9UET6 329 aa6.28□□□□□ -1.4
CD44-214ENST00000525211 GRID1Q9ULK0 1009 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms