RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 BEAN1Q3B7T3 259 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 NRN1LQ496H8 165 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 MRNIPQ6NTE8 343 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 TMEM71Q6P5X7 295 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 ZADH2Q8N4Q0 377 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 CSGALNACT2Q8N6G5 542 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 SYT2Q8N9I0 419 aaPredicted RBP6.82□□□□□ -1.32
NEDD8-203ENST00000524927 IL17DQ8TAD2 202 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 FIBINQ8TAL6 211 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 ERMNQ8TAM6 284 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 FAM71BQ8TC56 605 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 RUFY2Q8WXA3 655 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 FAM136AQ96C01 138 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 STAMBPL1Q96FJ0 436 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 SMARCD1Q96GM5 515 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 OSBPL9Q96SU4 736 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 TIPINQ9BVW5 301 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 SLC26A6Q9BXS9 759 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.82□□□□□ -1.32
NEDD8-203ENST00000524927 MAGEH1Q9H213 219 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 SLC25A32Q9H2D1 315 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 UNKLQ9H9P5 680 aaKnown RBP6.82□□□□□ -1.32
NEDD8-203ENST00000524927 APMAPQ9HDC9 416 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 CLIC5Q9NZA1 410 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 GRHPRQ9UBQ7 328 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 KCNN3Q9UGI6 736 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 VPS51Q9UID3 782 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 PADI1Q9ULC6 663 aa6.82□□□□□ -1.32
NEDD8-203ENST00000524927 UNC119BA6NIH7 251 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 A6NL46 340 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 SYT5O00445 386 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 CCNT2O60583 730 aaKnown RBP6.81□□□□□ -1.32
NEDD8-203ENST00000524927 TMEM63AO94886 807 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 ZWINTO95229 277 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 MOCS3O95396 460 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 LATS1O95835 1130 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 MT-ND3P03897 115 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 PLEKP08567 350 aaPredicted RBP6.81□□□□□ -1.32
NEDD8-203ENST00000524927 PECAM1P16284 738 aaPredicted RBP6.81□□□□□ -1.32
NEDD8-203ENST00000524927 IFNAR1P17181 557 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 SCP2P22307 547 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 SERPINF1P36955 418 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 NDST2P52849 883 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 TFAMQ00059 246 aaKnown RBP6.81□□□□□ -1.32
NEDD8-203ENST00000524927 SGCGQ13326 291 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 CCNIQ14094 377 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 TMTC4Q5T4D3 741 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 DEPDC1Q5TB30 811 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 MANEALQ5VSG8 457 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 ARHGAP22Q7Z5H3 698 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 TECPR1Q7Z6L1 1165 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 WDR49Q8IV35 697 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 MFN1Q8IWA4 741 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 B3GALNT2Q8NCR0 500 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 SLC25A43Q8WUT9 341 aaPredicted RBP6.81□□□□□ -1.32
NEDD8-203ENST00000524927 ASB12Q8WXK4 309 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 SORBS1Q9BX66 1292 aaKnown RBP6.81□□□□□ -1.32
NEDD8-203ENST00000524927 ACTRT3Q9BYD9 372 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 TRIM5Q9C035 493 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 AMBRA1Q9C0C7 1298 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 SNX25Q9H3E2 840 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 LIME1Q9H400 295 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 OLAHQ9NV23 265 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 STMN3Q9NZ72 180 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.81□□□□□ -1.32
NEDD8-203ENST00000524927 RASAL2Q9UJF2 1139 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 TESMINQ9Y4I5 508 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 DGKBQ9Y6T7 804 aa6.81□□□□□ -1.32
NEDD8-203ENST00000524927 MARCH11A6NNE9 402 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 CD3EAPO15446 510 aaKnown RBP6.8□□□□□ -1.32
NEDD8-203ENST00000524927 TNFRSF6BO95407 300 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 PTPN4P29074 926 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 CCT5P48643 541 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 KCNK10P57789 538 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 DEFB113Q30KQ7 82 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 TIGD2Q4W5G0 525 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 SHEQ5VZ18 495 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 FAAH2Q6GMR7 532 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 TMEM207Q6UWW9 146 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 PAQR9Q6ZVX9 377 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 C17orf82Q86X59 251 aaPredicted RBP6.8□□□□□ -1.32
NEDD8-203ENST00000524927 ZMIZ2Q8NF64 920 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 SLC30A5Q8TAD4 765 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 CT55Q8WUE5 264 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 LARP4BQ92615 738 aaKnown RBP6.8□□□□□ -1.32
NEDD8-203ENST00000524927 DVL3Q92997 716 aaPredicted RBP6.8□□□□□ -1.32
NEDD8-203ENST00000524927 CCDC127Q96BQ5 260 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 TBC1D20Q96BZ9 403 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 PTCD3Q96EY7 689 aaKnown RBP6.8□□□□□ -1.32
NEDD8-203ENST00000524927 RMND5BQ96G75 393 aaPredicted RBP6.8□□□□□ -1.32
NEDD8-203ENST00000524927 HPDLQ96IR7 371 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 MRPL45Q9BRJ2 306 aaKnown RBP6.8□□□□□ -1.32
NEDD8-203ENST00000524927 BRD8Q9H0E9 1235 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 DPEP3Q9H4B8 488 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 CSNK1G1Q9HCP0 422 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 DYRK4Q9NR20 520 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 DNAJB11Q9UBS4 358 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 ZNHIT2Q9UHR6 403 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 NME7Q9Y5B8 376 aa6.8□□□□□ -1.32
NEDD8-203ENST00000524927 PPM1DO15297 605 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms