RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 LRRK1Q38SD2 2015 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 TECTAO75443 2155 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 A0A087X0T9 212 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 FAM92AA1XBS5 289 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 SLC38A8A6NNN8 435 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 PRSS47A8MTI9 375 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 TMCO5BA8MYB1 307 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 AKR1B15C9JRZ8 316 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 I6L893 689 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 XPO1O14980 1071 aaKnown RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 PAPSS1O43252 624 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 MBTPS2O43462 519 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF432O94892 652 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 PPP1R3DO95685 299 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 FYNP06241 537 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 TPM2P07951 284 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 ZDHHC11BP0C7U3 371 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 FAM228BP0C875 321 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 MYZAPP0CAP1 466 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 FAM200BP0CF97 657 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 P4HA1P13674 534 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 FERP16591 822 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 CEBPBP17676 345 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 GNLYP22749 145 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 SP100P23497 879 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 FCARP24071 287 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 HOXA9P31269 272 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 MAGEA11P43364 429 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 FAM3BP58499 235 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 DAOAP59103 153 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 YWHAEP62258 255 aaKnown RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 ZBED6P86452 979 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 CCZ1BP86790 482 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 CCZ1P86791 482 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 OGDHQ02218 1023 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 GFPT1Q06210 699 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 ADIGQ0VDE8 80 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 BST2Q10589 180 aaKnown RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 PDCLQ13371 301 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 PLD1Q13393 1074 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 TAF5Q15542 800 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 MPEG1Q2M385 716 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 TDRD12Q587J7 1177 aaKnown RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 CYP4A22Q5TCH4 519 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 SFMBT2Q5VUG0 894 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 IZUMO3Q5VZ72 239 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 RAD9BQ6WBX8 426 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 C4orf50Q6ZRC1 276 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 Q6ZSV7 163 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 DENND5BQ6ZUT9 1274 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 FAM183BPQ6ZVS7 135 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 MON1BQ7L1V2 547 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 C16orf82Q7Z2V1 217 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 CACNA2D4Q7Z3S7 1137 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 SCD5Q86SK9 330 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 PHLDB2Q86SQ0 1253 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 SCN4BQ8IWT1 228 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 CLIP4Q8N3C7 705 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 ENDOVQ8N8Q3 282 aaKnown RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 ANKRD52Q8NB46 1076 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 JOSD2Q8TAC2 188 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 ITFG1Q8TB96 612 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 C2orf15Q8WU43 125 aaKnown RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 ING5Q8WYH8 240 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 SUSD6Q92537 303 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 CASP10Q92851 521 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 ARHGEF26Q96DR7 871 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 SMARCD1Q96GM5 515 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 TNIP3Q96KP6 325 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 SPATA17Q96L03 361 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 C8orf48Q96LL4 319 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 DOCK7Q96N67 2140 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF830Q96NB3 372 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 LRRC3BQ96PB8 259 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 SPAG5Q96R06 1193 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 MYADMQ96S97 322 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 CDCA3Q99618 268 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 AGPAT1Q99943 283 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 MED10Q9BTT4 135 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 NUP58Q9BVL2 599 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 TMEM120AQ9BXJ8 343 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 POLDIP3Q9BY77 421 aaKnown RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 FRMD8Q9BZ67 464 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 ULBP1Q9BZM6 244 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 EDEM3Q9BZQ6 932 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 TP63Q9H3D4 680 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 PLEKHA4Q9H4M7 779 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 POMKQ9H5K3 350 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 FAM124BQ9H5Z6 455 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 UBE2ZQ9H832 354 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 ACTR5Q9H9F9 607 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 DMAP1Q9NPF5 467 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 ZDHHC7Q9NXF8 308 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 IL37Q9NZH6 218 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 KLHL42Q9P2K6 505 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 STK39Q9UEW8 545 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 PLEKHB1Q9UF11 243 aaPredicted RBP3□□□□□ -1.93
CSDE1-208ENST00000524652 KCNG2Q9UJ96 466 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 PKP3Q9Y446 797 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 PTPRZ1P23471 2315 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms