RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 SURF1Q15526 300 aa9.96□□□□□ -0.81
SPIDR-224ENST00000524126 GOLGA7BQ2TAP0 167 aa9.96□□□□□ -0.81
SPIDR-224ENST00000524126 COQ5Q5HYK3 327 aa9.96□□□□□ -0.81
SPIDR-224ENST00000524126 CELF3Q5SZQ8 465 aaKnown RBP9.96□□□□□ -0.81
SPIDR-224ENST00000524126 ZNF648Q5T619 568 aaPredicted RBP9.96□□□□□ -0.81
SPIDR-224ENST00000524126 PPP1R26Q5T8A7 1209 aaPredicted RBP9.96□□□□□ -0.81
SPIDR-224ENST00000524126 CAPN13Q6MZZ7 669 aaPredicted RBP9.96□□□□□ -0.81
SPIDR-224ENST00000524126 XKRXQ6PP77 449 aa9.96□□□□□ -0.81
SPIDR-224ENST00000524126 DGLUCYQ7Z3D6 616 aa9.96□□□□□ -0.81
SPIDR-224ENST00000524126 METTL3Q86U44 580 aaKnown RBP9.96□□□□□ -0.81
SPIDR-224ENST00000524126 BCL7CQ8WUZ0 217 aaPredicted RBP9.96□□□□□ -0.81
SPIDR-224ENST00000524126 DCLRE1CQ96SD1 692 aaKnown RBP9.96□□□□□ -0.81
SPIDR-224ENST00000524126 PDCD2LQ9BRP1 358 aa9.96□□□□□ -0.81
SPIDR-224ENST00000524126 SRRQ9GZT4 340 aa9.96□□□□□ -0.81
SPIDR-224ENST00000524126 MS4A7Q9GZW8 240 aaPredicted RBP9.96□□□□□ -0.81
SPIDR-224ENST00000524126 FANCFQ9NPI8 374 aa9.96□□□□□ -0.81
SPIDR-224ENST00000524126 PXMP2Q9NR77 195 aa9.96□□□□□ -0.81
SPIDR-224ENST00000524126 MCUBQ9NWR8 336 aa9.96□□□□□ -0.81
SPIDR-224ENST00000524126 TNFRSF10DQ9UBN6 386 aa9.96□□□□□ -0.81
SPIDR-224ENST00000524126 MRPS7Q9Y2R9 242 aaKnown RBP9.96□□□□□ -0.81
SPIDR-224ENST00000524126 ZNF487B1APH4 448 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 PCDHGA12O60330 932 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 ZNF623O75123 536 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 PIGRP01833 764 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 IFNA16P05015 189 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 DNAJB2P25686 324 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 SSTR4P31391 388 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 GNPDA1P46926 289 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 NUDT6P53370 316 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 SLC6A3Q01959 620 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 RIN1Q13671 783 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 QPRTQ15274 297 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 KCTD11Q693B1 232 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 Q6ZPB1 254 aaPredicted RBP9.96□□□□□ -0.82
SPIDR-224ENST00000524126 KIF18BQ86Y91 864 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 CHPFQ8IZ52 775 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 ZNF366Q8N895 744 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 CDYL2Q8N8U2 506 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 ZNF680Q8NEM1 530 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 ST8SIA4Q92187 359 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 FAM162AQ96A26 154 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 ZNF583Q96ND8 569 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 GFM1Q96RP9 751 aaKnown RBP9.96□□□□□ -0.82
SPIDR-224ENST00000524126 PPA2Q9H2U2 334 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 RRAGCQ9HB90 399 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 CCNB1IP1Q9NPC3 277 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 SIX4Q9UIU6 781 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 KLHL21Q9UJP4 597 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 PCDHA10Q9Y5I2 948 aa9.96□□□□□ -0.82
SPIDR-224ENST00000524126 SLC22A3O75751 556 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 PTHP01270 115 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 ITGB1P05556 798 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 PROS1P07225 676 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 LTA4HP09960 611 aaKnown RBP9.95□□□□□ -0.82
SPIDR-224ENST00000524126 ITGALP20701 1170 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 EFNA1P20827 205 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-224ENST00000524126 CPT1AP50416 773 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 KPNA2P52292 529 aaKnown RBP9.95□□□□□ -0.82
SPIDR-224ENST00000524126 DGKQP52824 942 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 ATN1P54259 1190 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-224ENST00000524126 HUNKP57058 714 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 GPR85P60893 370 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 CXCR4P61073 352 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 GPR68Q15743 365 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 GPR19Q15760 415 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 CARD16Q5EG05 197 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 DLEU7Q6UYE1 221 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 LRRC8DQ7L1W4 858 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 ADHFE1Q8IWW8 467 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 RYBPQ8N488 228 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-224ENST00000524126 TTC29Q8NA56 475 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-224ENST00000524126 OR10A6Q8NH74 314 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 CLHC1Q8NHS4 586 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 ZNF675Q8TD23 568 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 NCLNQ969V3 563 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 CCDC126Q96EE4 140 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 ZNF668Q96K58 619 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-224ENST00000524126 C12orf42Q96LP6 360 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 FAM129BQ96TA1 746 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 LPIN3Q9BQK8 851 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 GTPBP2Q9BX10 602 aaKnown RBP9.95□□□□□ -0.82
SPIDR-224ENST00000524126 BCO2Q9BYV7 579 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 ASAH2Q9NR71 780 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 ELF5Q9UKW6 265 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-224ENST00000524126 RIMKLBQ9ULI2 386 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 PPP2R3BQ9Y5P8 575 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 CLCA3PQ9Y6N3 262 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 A0A1W2PRG6 482 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 WASHC1A8K0Z3 465 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 NT5C1B-RDH14C9J2C7 533 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 H0YCG3 227 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 PMPCBO75439 489 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 DIRAS1O95057 198 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 ALDH1A1P00352 501 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 VIPP01282 170 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 ALAS2P22557 587 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 SFNP31947 248 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 CCT3P49368 545 aaKnown RBP9.95□□□□□ -0.82
SPIDR-224ENST00000524126 GTF2H3Q13889 308 aa9.95□□□□□ -0.82
SPIDR-224ENST00000524126 SOWAHAQ2M3V2 549 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms