RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 HDAC10Q969S8 669 aa13.24□□□□□ -0.29
NKX3-1-202ENST00000523261 HGH1Q9BTY7 390 aa13.24□□□□□ -0.29
NKX3-1-202ENST00000523261 MVB12BQ9H7P6 319 aa13.24□□□□□ -0.29
NKX3-1-202ENST00000523261 CUTCQ9NTM9 273 aa13.24□□□□□ -0.29
NKX3-1-202ENST00000523261 SPHK1Q9NYA1 384 aa13.24□□□□□ -0.29
NKX3-1-202ENST00000523261 C3orf18Q9UK00 162 aa13.24□□□□□ -0.29
NKX3-1-202ENST00000523261 ASB1Q9Y576 335 aa13.24□□□□□ -0.29
NKX3-1-202ENST00000523261 HIVEP2P31629 2446 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 FAM237BA0A1B0GVD1 139 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 KCNK1O00180 336 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 TTI1O43156 1089 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 PCSK6P29122 969 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 CHRNB4P30926 498 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 FANCCQ00597 558 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 ZBTB17Q13105 803 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 PRKG2Q13237 762 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 PCSK7Q16549 785 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 ZDHHC20Q5W0Z9 365 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 NEK10Q6ZWH5 1172 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 PRSS58Q8IYP2 241 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 DTWD1Q8N5C7 304 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 METTL27Q8N6F8 245 aaPredicted RBP13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 AMER2Q8N7J2 671 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 HM13Q8TCT9 377 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 TADA1Q96BN2 335 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 IMP4Q96G21 291 aaKnown RBP13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 RMND5BQ96G75 393 aaPredicted RBP13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 FRMD6Q96NE9 622 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 SRPK1Q96SB4 655 aaKnown RBP13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 OR52A5Q9H2C5 316 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 CBX8Q9HC52 389 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 SMOXQ9NWM0 555 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 STMN3Q9NZ72 180 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 IL17CQ9P0M4 197 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 LRFN1Q9P244 771 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 ADAM21Q9UKJ8 722 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 RNF6Q9Y252 685 aa13.23□□□□□ -0.29
NKX3-1-202ENST00000523261 IGHV1-45A0A0A0MS14 117 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 GLYATL1P3A0A0U1RQE8 302 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 FAM171A2A8MVW0 826 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 TMCO5BA8MYB1 307 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 NDST3O95803 873 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 CD48P09326 243 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 ZGLP1P0C6A0 271 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 MCM3P25205 808 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 HOXC12P31275 282 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 EEF1A2Q05639 463 aaKnown RBP13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 ZNF33BQ06732 778 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 ITGA9Q13797 1035 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 BOP1Q14137 746 aaKnown RBP13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 CCDC183Q5T5S1 534 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 YOD1Q5VVQ6 348 aaPredicted RBP13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 UNC5AQ6ZN44 842 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 MCATQ8IVS2 390 aaKnown RBP13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 GPATCH1Q9BRR8 931 aaKnown RBP13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 HES7Q9BYE0 225 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 CLEC4MQ9H2X3 399 aaPredicted RBP13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 RIC8BQ9NVN3 520 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 IL1RAPL1Q9NZN1 696 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 EDARQ9UNE0 448 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 MAU2Q9Y6X3 613 aa13.22□□□□□ -0.29
NKX3-1-202ENST00000523261 IFRD1O00458 451 aaPredicted RBP13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 KLK8O60259 260 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 GADD45BO75293 160 aaPredicted RBP13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 CHRM5P08912 532 aaPredicted RBP13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 IFI35P80217 286 aaPredicted RBP13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 NAPRTQ6XQN6 538 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 LAPTM4BQ86VI4 370 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 KRTAP1-3Q8IUG1 177 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 MDS2Q8NDY4 140 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 ACRBPQ8NEB7 543 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 FAM71BQ8TC56 605 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 MIEF2Q96C03 454 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 SIGLEC12Q96PQ1 595 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 KLHL1Q9NR64 748 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 RASSF1Q9NS23 344 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 MKL2Q9ULH7 1088 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 L3MBTL1Q9Y468 752 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 HRH3Q9Y5N1 445 aa13.21□□□□□ -0.29
NKX3-1-202ENST00000523261 ZANQ9Y493 2812 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 PDHA2P29803 388 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 PEBP1P30086 187 aaKnown RBP13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 SHMT2P34897 504 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 CD151P48509 253 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 SLC25A11Q02978 314 aaKnown RBP13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 GBE1Q04446 702 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 OCA2Q04671 838 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 SLC10A2Q12908 348 aaPredicted RBP13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 KRT81Q14533 505 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 GRM7Q14831 915 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 NOMO1Q15155 1222 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 SLC14A2Q15849 920 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 DEFB113Q30KQ7 82 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 CLYBLQ8N0X4 340 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 MLKLQ8NB16 471 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 CCNYQ8ND76 341 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 TFGQ92734 400 aaPredicted RBP13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 SCMH1Q96GD3 660 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 SYT11Q9BT88 431 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms