RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 BDKRB1P46663 353 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 CARSP49589 748 aaKnown RBP15.82■□□□□ 0.12
PABPC1-221ENST00000522720 PDIA2Q13087 525 aaKnown RBP15.82■□□□□ 0.12
PABPC1-221ENST00000522720 SLC5A12Q1EHB4 618 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 SOWAHCQ53LP3 525 aaPredicted RBP15.82■□□□□ 0.12
PABPC1-221ENST00000522720 TEDDM1Q5T9Z0 273 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 KIAA1614Q5VZ46 1190 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 DUPD1Q68J44 220 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 NEK10Q6ZWH5 1172 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 GALNT7Q86SF2 657 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 ANKMY2Q8IV38 441 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 C2orf73Q8N5S3 287 aaPredicted RBP15.82■□□□□ 0.12
PABPC1-221ENST00000522720 LMNTD1Q8N9Z9 388 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 SLC22A18Q96BI1 424 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 RNF31Q96EP0 1072 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 TCTN2Q96GX1 697 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 BBC3Q96PG8 261 aaPredicted RBP15.82■□□□□ 0.12
PABPC1-221ENST00000522720 GPR21Q99679 349 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 SLC12A9Q9BXP2 914 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 GPN2Q9H9Y4 310 aaPredicted RBP15.82■□□□□ 0.12
PABPC1-221ENST00000522720 PPANQ9NQ55 473 aaKnown RBP15.82■□□□□ 0.12
PABPC1-221ENST00000522720 CDC23Q9UJX2 597 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 PADI1Q9ULC6 663 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 ATMQ13315 3056 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 ATRXP46100 2492 aa15.82■□□□□ 0.12
PABPC1-221ENST00000522720 PIEZO2Q9H5I5 2752 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 ERVH48-1M5A8F1 160 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 PRICKLE3O43900 615 aaPredicted RBP15.81■□□□□ 0.12
PABPC1-221ENST00000522720 VPS26AO75436 327 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 PSIP1O75475 530 aaKnown RBP15.81■□□□□ 0.12
PABPC1-221ENST00000522720 AHSGP02765 367 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 NTRK1P04629 796 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 ENO3P13929 434 aaPredicted RBP15.81■□□□□ 0.12
PABPC1-221ENST00000522720 CALCOCO2Q13137 446 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 ZIC1Q15915 447 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 CCSMST1Q4G0I0 132 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 TRMT10BQ6PF06 316 aaKnown RBP15.81■□□□□ 0.12
PABPC1-221ENST00000522720 CDHR3Q6ZTQ4 885 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 RAB42Q8N4Z0 105 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 C19orf47Q8N9M1 422 aaKnown RBP15.81■□□□□ 0.12
PABPC1-221ENST00000522720 LSM14AQ8ND56 463 aaKnown RBP15.81■□□□□ 0.12
PABPC1-221ENST00000522720 HMGCLL1Q8TB92 370 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 CD200R1Q8TD46 325 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 TTC9Q92623 222 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 WBP1Q96G27 269 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 SLC45A3Q96JT2 553 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 DPH5Q9H2P9 285 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 FAM60AQ9NP50 221 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 FAM114A2Q9NRY5 505 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 TSR3Q9UJK0 312 aaKnown RBP15.81■□□□□ 0.12
PABPC1-221ENST00000522720 SERTAD3Q9UJW9 196 aa15.81■□□□□ 0.12
PABPC1-221ENST00000522720 ARHGEF33A8MVX0 844 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 TMEM150CB9EJG8 249 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 ATXN7O15265 892 aaPredicted RBP15.8■□□□□ 0.12
PABPC1-221ENST00000522720 SCRG1O75711 98 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 CATP04040 527 aaKnown RBP15.8■□□□□ 0.12
PABPC1-221ENST00000522720 MPC1LP0DKB6 136 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 CBSLP0DN79 551 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 CBSP35520 551 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 SKIV2L2P42285 1042 aaKnown RBP15.8■□□□□ 0.12
PABPC1-221ENST00000522720 TIAL1Q01085 375 aaKnown RBP eCLIP15.8■□□□□ 0.126e-11■■■■□ 23.2
PABPC1-221ENST00000522720 CKAP4Q07065 602 aaKnown RBP15.8■□□□□ 0.12
PABPC1-221ENST00000522720 CUL1Q13616 776 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 FASTKD3Q14CZ7 662 aaKnown RBP15.8■□□□□ 0.12
PABPC1-221ENST00000522720 CYP2A13Q16696 494 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 UGT3A1Q6NUS8 523 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 PCSK4Q6UW60 755 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 CYHR1Q6ZMK1 362 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 TMEM126BQ8IUX1 230 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 SPNS2Q8IVW8 549 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 FBXO36Q8NEA4 188 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 OR9A1PQ8NGU1 263 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 OR1L3Q8NH93 324 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 DENND1AQ8TEH3 1009 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 ASB11Q8WXH4 323 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 NDNQ99608 321 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 LHX9Q9NQ69 397 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 TAS2R13Q9NYV9 303 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 MOCS1Q9NZB8 636 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 GRHL1Q9NZI5 618 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 SPATA7Q9P0W8 599 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 IL17BQ9UHF5 180 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 UTP11Q9Y3A2 253 aaKnown RBP15.8■□□□□ 0.12
PABPC1-221ENST00000522720 PCDHB3Q9Y5E6 796 aa15.8■□□□□ 0.12
PABPC1-221ENST00000522720 KRT87PA6NCN2 255 aa15.79■□□□□ 0.12
PABPC1-221ENST00000522720 ZNF891A8MT65 544 aaPredicted RBP15.79■□□□□ 0.12
PABPC1-221ENST00000522720 GFYI3L273 518 aa15.79■□□□□ 0.12
PABPC1-221ENST00000522720 MYO1CO00159 1063 aa15.79■□□□□ 0.12
PABPC1-221ENST00000522720 EIF3FO00303 357 aaPredicted RBP15.79■□□□□ 0.12
PABPC1-221ENST00000522720 TERTO14746 1132 aaKnown RBP15.79■□□□□ 0.12
PABPC1-221ENST00000522720 CPNE3O75131 537 aaKnown RBP15.79■□□□□ 0.12
PABPC1-221ENST00000522720 URI1O94763 535 aaPredicted RBP15.79■□□□□ 0.12
PABPC1-221ENST00000522720 FKBP9O95302 570 aa15.79■□□□□ 0.12
PABPC1-221ENST00000522720 F8A1P23610 371 aa15.79■□□□□ 0.12
PABPC1-221ENST00000522720 DLSTP36957 453 aa15.79■□□□□ 0.12
PABPC1-221ENST00000522720 GABRA4P48169 554 aa15.79■□□□□ 0.12
PABPC1-221ENST00000522720 ITGA1P56199 1179 aa15.79■□□□□ 0.12
PABPC1-221ENST00000522720 CYP4F2P78329 520 aa15.79■□□□□ 0.12
PABPC1-221ENST00000522720 SF1Q15637 639 aaKnown RBP15.79■□□□□ 0.12
PABPC1-221ENST00000522720 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms