RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 AIREO43918 545 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 OR10H3O60404 316 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 OR4F21O95013 312 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 PRKCGP05129 697 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 IGFALSP35858 605 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 WDR45BQ5MNZ6 344 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 GK5Q6ZS86 529 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 PTCHD4Q6ZW05 846 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 ZNF366Q8N895 744 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 P2RY13Q9BPV8 354 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 PTBP2Q9UKA9 531 aaKnown RBP15.86■□□□□ 0.13
USP42-207ENST00000521713 LATS1O95835 1130 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 GRM2Q14416 872 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 EML3Q32P44 896 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 NIPAL1Q6NVV3 410 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 ZZZ3Q8IYH5 903 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 XAGE5Q8WWM1 108 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 DDX1Q92499 740 aaKnown RBP15.86■□□□□ 0.13
USP42-207ENST00000521713 ZNF641Q96N77 438 aaPredicted RBP15.86■□□□□ 0.13
USP42-207ENST00000521713 ANKHQ9HCJ1 492 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 WDR6Q9NNW5 1121 aaKnown RBP15.86■□□□□ 0.13
USP42-207ENST00000521713 SAGE1Q9NXZ1 904 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 NFKBIL1Q9UBC1 381 aaPredicted RBP15.86■□□□□ 0.13
USP42-207ENST00000521713 MRPS7Q9Y2R9 242 aaKnown RBP15.86■□□□□ 0.13
USP42-207ENST00000521713 SPEF1Q9Y4P9 236 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 DGKBQ9Y6T7 804 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 RGPD1P0DJD0 1748 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 SOCS5O75159 536 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 PRG2P13727 222 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 PRR5P85299 388 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 SLC9A5Q14940 896 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 LARS2Q15031 903 aaKnown RBP15.86■□□□□ 0.13
USP42-207ENST00000521713 KLHDC10Q6PID8 442 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 CPNE8Q86YQ8 564 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 EXOSC8Q96B26 276 aaKnown RBP15.86■□□□□ 0.13
USP42-207ENST00000521713 TTYH1Q9H313 450 aaPredicted RBP15.86■□□□□ 0.13
USP42-207ENST00000521713 USP29Q9HBJ7 922 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 C1orf109Q9NX04 203 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 CDC14AQ9UNH5 594 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 CASKO14936 926 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 SPIBQ01892 262 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 RAB33AQ14088 237 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 CCNIQ14094 377 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 RBM12BQ8IXT5 1001 aaKnown RBP15.86■□□□□ 0.13
USP42-207ENST00000521713 BANPQ8N9N5 519 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 MAT2BQ9NZL9 334 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 SEC14L3Q9UDX4 400 aa15.86■□□□□ 0.13
USP42-207ENST00000521713 PSMD11O00231 422 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 KERAO60938 352 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 TBX10O75333 385 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 SCELO95171 688 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 EIF4HQ15056 248 aaKnown RBP15.85■□□□□ 0.13
USP42-207ENST00000521713 TMPRSS11AQ6ZMR5 421 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 SPPL2CQ8IUH8 684 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 ZNF563Q8TA94 476 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 TOP1MTQ969P6 601 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 HAVCR1Q96D42 359 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 SLC2A13Q96QE2 648 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 CALML5Q9NZT1 146 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 B3GALT2O43825 422 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 KHDRBS3O75525 346 aaKnown RBP15.85■□□□□ 0.13
USP42-207ENST00000521713 CNTN5O94779 1100 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 PRLP01236 227 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 IST1P53990 364 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 PLEKHG4Q58EX7 1191 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 FAM180AQ6UWF9 173 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 USP43Q70EL4 1123 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 KBTBD6Q86V97 674 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 TMC8Q8IU68 726 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 GLB1L3Q8NCI6 653 aaPredicted RBP15.85■□□□□ 0.13
USP42-207ENST00000521713 LMO3Q8TAP4 145 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 PIH1D2Q8WWB5 315 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 SMARCD2Q92925 531 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 LENG8Q96PV6 779 aaPredicted RBP15.85■□□□□ 0.13
USP42-207ENST00000521713 SLC2A11Q9BYW1 496 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 ABI3Q9P2A4 366 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 A0A1W2PQ72 361 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 EME2A4GXA9 379 aaPredicted RBP15.85■□□□□ 0.13
USP42-207ENST00000521713 CBSLP0DN79 551 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 ATP1B2P14415 290 aaPredicted RBP15.85■□□□□ 0.13
USP42-207ENST00000521713 CBSP35520 551 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 ZNF155Q12901 538 aaPredicted RBP15.85■□□□□ 0.13
USP42-207ENST00000521713 RBM48Q5RL73 367 aaKnown RBP15.85■□□□□ 0.13
USP42-207ENST00000521713 FAM220AQ7Z4H9 259 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 OR10T2Q8NGX3 314 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 ZNF840PA6NDX5 716 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 PTX3P26022 381 aaPredicted RBP15.85■□□□□ 0.13
USP42-207ENST00000521713 FOXM1Q08050 763 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 CYP4F3Q08477 520 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 ZNF829Q3KNS6 432 aaPredicted RBP15.85■□□□□ 0.13
USP42-207ENST00000521713 NADK2Q4G0N4 442 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 C6orf89Q6UWU4 347 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 DEF8Q6ZN54 512 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 FAM129CQ86XR2 697 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 TMEM126BQ8IUX1 230 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 FAM46DQ8NEK8 389 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 TSGA13Q96PP4 275 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 TMEM209Q96SK2 561 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 EQTNQ9NQ60 294 aa15.85■□□□□ 0.13
USP42-207ENST00000521713 LAMB4A4D0S4 1761 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms