RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 C17orf113A0A1B0GUU1 675 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 CCDC78A2IDD5 438 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 OR6C74A6NCV1 312 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 PABPN1LA6NDY0 278 aaKnown RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 E9PLN8 166 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 F8VZ95 297 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 PES1O00541 588 aaKnown RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 SOCS6O14544 535 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ZSCAN9O15535 394 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 MAFKO60675 156 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 OR2B3O76000 313 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ZWINTO95229 277 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 MED26O95402 600 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 LCA5LO95447 670 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 HPP00738 406 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 GHRHP01286 108 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 HEXAP06865 529 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 PNMA6AP0CW24 399 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 UNGP13051 313 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 IL4RP24394 825 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 DNASE1P24855 282 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ADSLP30566 484 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ARL4AP40617 200 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 MEOX1P50221 254 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ZNF75DP51815 510 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 CTSCP53634 463 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 TERF1P54274 439 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ARSFP54793 590 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 STX17P56962 302 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 MAXP61244 160 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 YBX1P67809 324 aaKnown RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 APBA1Q02410 837 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ITKQ08881 620 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 TMEM115Q12893 351 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 DPYSQ14117 519 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 IQCB1Q15051 598 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 C3AR1Q16581 482 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 TSNAXIP1Q2TAA8 658 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 C11orf91Q3C1V1 193 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 NKAIN1Q4KMZ8 207 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 PPP6R3Q5H9R7 873 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ZDHHC20Q5W0Z9 365 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 DNAJC24Q6P3W2 148 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 DCUN1D2Q6PH85 259 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 TMCO3Q6UWJ1 677 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 LINC00696Q6ZRV3 163 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 LUZP1Q86V48 1076 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 HOOK3Q86VS8 718 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 PHF13Q86YI8 300 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 SPPL2CQ8IUH8 684 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 LMNTD2Q8IXW0 634 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 KBTBD2Q8IY47 623 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 TEX26Q8N6G2 289 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 NPWQ8N729 165 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 LRRN4CLQ8ND94 238 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ACVR1CQ8NER5 493 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 MYRIPQ8NFW9 859 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 CCDC110Q8TBZ0 833 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 DTX3LQ8TDB6 740 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ADAMTS18Q8TE60 1221 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ASB5Q8WWX0 329 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ALKBH8Q96BT7 664 aaKnown RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 MBD6Q96DN6 1003 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ARSGQ96EG1 525 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 C18orf12Q96KH6 178 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 MCEEQ96PE7 176 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 VKORC1Q9BQB6 163 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 TUBGCP2Q9BSJ2 902 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 TRIM5Q9C035 493 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 SRMSQ9H3Y6 488 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 GSX1Q9H4S2 264 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 NLRC4Q9NPP4 1024 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 CCM2LQ9NUG4 571 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 IMP3Q9NV31 184 aaKnown RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 IL1RAPL1Q9NZN1 696 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 SLC24A2Q9UI40 661 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 ST6GALNAC2Q9UJ37 374 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 TINAGQ9UJW2 476 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 HS3ST3B1Q9Y662 390 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 STAB1Q9NY15 2570 aa4.7□□□□□ -1.66
SDCBP-207ENST00000520168 SNRNP200O75643 2136 aaKnown RBP4.7□□□□□ -1.66
SDCBP-207ENST00000520168 NBEAL1Q6ZS30 2694 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 FN1P02751 2386 aaKnown RBP4.69□□□□□ -1.66
SDCBP-207ENST00000520168 JMJD1CQ15652 2540 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 A0A1B0GX78 115 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 C2orf74A8MZ97 194 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 H3BMH7 237 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 H3BRJ5 948 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 PRRG2O14669 202 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 MAP2K7O14733 419 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 RNF8O76064 485 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 PRAMEF1O95521 474 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 TSPAN12O95859 305 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 ONECUT2O95948 504 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 TGFB1P01137 390 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 UQCRHP07919 91 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 TPM2P07951 284 aa4.69□□□□□ -1.66
SDCBP-207ENST00000520168 HOXD4P09016 255 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-207ENST00000520168 SLC35G4P0C7Q5 338 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms