RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 NTSR1P30989 418 aa17.96■□□□□ 0.47
FAM49B-214ENST00000519540 CTHP32929 405 aa17.96■□□□□ 0.47
FAM49B-214ENST00000519540 HALP42357 657 aa17.96■□□□□ 0.47
FAM49B-214ENST00000519540 CDK3Q00526 305 aa17.96■□□□□ 0.47
FAM49B-214ENST00000519540 TMEM196Q5HYL7 178 aa17.96■□□□□ 0.47
FAM49B-214ENST00000519540 HABP4Q5JVS0 413 aaKnown RBP17.96■□□□□ 0.47
FAM49B-214ENST00000519540 ICE2Q659A1 982 aa17.96■□□□□ 0.47
FAM49B-214ENST00000519540 PRMT9Q6P2P2 845 aa17.96■□□□□ 0.47
FAM49B-214ENST00000519540 BHLHE22Q8NFJ8 381 aaPredicted RBP17.96■□□□□ 0.47
FAM49B-214ENST00000519540 OR56A3Q8NH54 315 aa17.96■□□□□ 0.47
FAM49B-214ENST00000519540 MKRN2Q9H000 416 aaKnown RBP17.96■□□□□ 0.47
FAM49B-214ENST00000519540 C1orf109Q9NX04 203 aa17.96■□□□□ 0.47
FAM49B-214ENST00000519540 LEF1Q9UJU2 399 aaPredicted RBP17.96■□□□□ 0.47
FAM49B-214ENST00000519540 PCYT1BQ9Y5K3 369 aaPredicted RBP17.96■□□□□ 0.47
FAM49B-214ENST00000519540 MTCH2Q9Y6C9 303 aa17.96■□□□□ 0.47
FAM49B-214ENST00000519540 ATG2BQ96BY7 2078 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 DYTNA2CJ06 578 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 UGDHO60701 494 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 JUPP14923 745 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 NEK2P51955 445 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 FOXM1Q08050 763 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 NFE2L1Q14494 772 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 PAGE3Q5JUK9 113 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 LIPJQ5W064 366 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 HM13Q8TCT9 377 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 MED8Q96G25 268 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 GABRG3Q99928 467 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 LGR4Q9BXB1 951 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 DPEP2Q9H4A9 486 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 NMRK1Q9NWW6 199 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 ASIC5Q9NY37 505 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 ABCD2Q9UBJ2 740 aa17.95■□□□□ 0.46
FAM49B-214ENST00000519540 SZT2Q5T011 3432 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 NVLO15381 856 aaKnown RBP17.94■□□□□ 0.46
FAM49B-214ENST00000519540 RSL1D1O76021 490 aaKnown RBP17.94■□□□□ 0.46
FAM49B-214ENST00000519540 JAK1P23458 1154 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 IRF8Q02556 426 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 CAPRIN1Q14444 709 aaKnown RBP17.94■□□□□ 0.46
FAM49B-214ENST00000519540 COL19A1Q14993 1142 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 KIAA0040Q15053 153 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 PLA2G4EQ3MJ16 856 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 TIGD2Q4W5G0 525 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 SDE2Q6IQ49 451 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 DOK6Q6PKX4 331 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 TRMT11Q7Z4G4 463 aaKnown RBP17.94■□□□□ 0.46
FAM49B-214ENST00000519540 SLC15A3Q8IY34 581 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 OR4K3Q96R72 315 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 PCDHAC1Q9H158 963 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 MBNL1Q9NR56 388 aaKnown RBP17.94■□□□□ 0.46
FAM49B-214ENST00000519540 ZFR2Q9UPR6 939 aaKnown RBP17.94■□□□□ 0.46
FAM49B-214ENST00000519540 PRKAB1Q9Y478 270 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 SERTM1A2A2V5 107 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 SLC6A2P23975 617 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 ACADLP28330 430 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 ATXN3P54252 364 aaPredicted RBP17.94■□□□□ 0.46
FAM49B-214ENST00000519540 PCDH1Q08174 1060 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 TRAP1Q12931 704 aaKnown RBP17.94■□□□□ 0.46
FAM49B-214ENST00000519540 NFYCQ13952 458 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 FGL2Q14314 439 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 FRG2Q64ET8 278 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 FAM83HQ6ZRV2 1179 aaPredicted RBP17.94■□□□□ 0.46
FAM49B-214ENST00000519540 DHDDSQ86SQ9 333 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 IL17RCQ8NAC3 791 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 PPFIBP2Q8ND30 876 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 FRG2BQ96QU4 278 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 TEX101Q9BY14 249 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 FBXL12Q9NXK8 326 aa17.94■□□□□ 0.46
FAM49B-214ENST00000519540 XIRP2A4UGR9 3374 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 NME4O00746 187 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 ADAM23O75077 832 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 EGFP01133 1207 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 CD22P20273 847 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 PRPH2P23942 346 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 YBX1P67809 324 aaKnown RBP17.93■□□□□ 0.46
FAM49B-214ENST00000519540 INPP5AQ14642 412 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 STARD3Q14849 445 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 PTGR1Q14914 329 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 XKR6Q5GH73 641 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 CACHD1Q5VU97 1274 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 LIX1Q8N485 282 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 ZNF480Q8WV37 535 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 NUDT8Q8WV74 236 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 E7EQ34 232 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 IFRD1O00458 451 aaPredicted RBP17.93■□□□□ 0.46
FAM49B-214ENST00000519540 PAK4O96013 591 aaPredicted RBP17.93■□□□□ 0.46
FAM49B-214ENST00000519540 VARSP26640 1264 aaKnown RBP17.93■□□□□ 0.46
FAM49B-214ENST00000519540 TRIM23P36406 574 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 MRPS22P82650 360 aaKnown RBP17.93■□□□□ 0.46
FAM49B-214ENST00000519540 DOC2AQ14183 400 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 PON2Q15165 354 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 TAF11Q15544 211 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 USP39Q53GS9 565 aaKnown RBP17.93■□□□□ 0.46
FAM49B-214ENST00000519540 AMZ2Q86W34 360 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 GANCQ8TET4 914 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 DNAJC9Q8WXX5 260 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 FAM131CQ96AQ9 280 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 C1QTNF2Q9BXJ5 285 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 ZDHHC5Q9C0B5 715 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 OR52A5Q9H2C5 316 aa17.93■□□□□ 0.46
FAM49B-214ENST00000519540 CMTM6Q9NX76 183 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms