RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ABHD17BQ5VST6 288 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 KLHL35Q6PF15 583 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 SHC4Q6S5L8 630 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 ARHGAP36Q6ZRI8 547 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 INTS8Q75QN2 995 aaKnown RBP6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 OOSP2Q86WS3 158 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 SLC13A5Q86YT5 568 aaPredicted RBP6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 PYROXD2Q8N2H3 581 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 METTL27Q8N6F8 245 aaPredicted RBP6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 FAM184AQ8NB25 1140 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 ZNF397Q8NF99 534 aaPredicted RBP6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 OR52N2Q8NGI0 321 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 SLC20A1Q8WUM9 679 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 TEKT4Q8WW24 435 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 PIH1D2Q8WWB5 315 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 NSUN5Q96P11 429 aaKnown RBP6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 YIPF4Q9BSR8 244 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 CRB3Q9BUF7 120 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 SCAND2PQ9GZW5 306 aaPredicted RBP6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 SAP130Q9H0E3 1048 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 DEF6Q9H4E7 631 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 AKTIPQ9H8T0 292 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 ZNF701Q9NV72 531 aaPredicted RBP6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 TMEM160Q9NX00 188 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 OR12D3Q9UGF7 316 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 SLC24A2Q9UI40 661 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 TMPRSS11EQ9UL52 423 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 RNF112Q9ULX5 631 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 PPIL1Q9Y3C6 166 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 SRPRBQ9Y5M8 271 aaKnown RBP6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 EPN1Q9Y6I3 576 aaPredicted RBP6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 AP1M2Q9Y6Q5 423 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 ROS1P08922 2347 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 PHF3Q92576 2039 aaKnown RBP6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 GSAPA4D1B5 854 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 NPIPA2E9PIF3 369 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 NPIPA3F8WFD2 350 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 MAP2K7O14733 419 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 VEGFDO43915 354 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 PRMT3O60678 531 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 FDXRP22570 491 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 ACVR2AP27037 513 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 OR1D4P47884 311 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 SCNN1BP51168 640 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 SLC6A3Q01959 620 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 CUL4BQ13620 913 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 CLEC12BQ2HXU8 276 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 PTPN20Q4JDL3 420 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 FBLN7Q53RD9 439 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 ARMC12Q5T9G4 340 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 Q6ZS46 218 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 ARHGEF18Q6ZSZ5 1173 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 C11orf57Q6ZUT1 292 aaPredicted RBP6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 ARHGEF19Q8IW93 802 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 PGBD5Q8N414 524 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 LIX1Q8N485 282 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 LRRC17Q8N6Y2 441 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 C3orf56Q8N813 242 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 OR4E2Q8NGC2 313 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 CELF6Q96J87 481 aaKnown RBP6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 IMMP1LQ96LU5 166 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 KREMEN1Q96MU8 473 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 OLFM1Q99784 485 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 TIMM29Q9BSF4 260 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 CATSPERBQ9H7T0 1116 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 UBTD1Q9HAC8 227 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 PLCB1Q9NQ66 1216 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 FRMD4BQ9Y2L6 1034 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 ALG6Q9Y672 507 aa6.39□□□□□ -1.39
CTNNA1-216ENST00000519489 FREM1Q5H8C1 2179 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 A8MUI8 341 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 DEFB108AA8MXU0 73 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 F8W735 103 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 BTN3A1O00481 513 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 EPB41L2O43491 1005 aaKnown RBP6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 CLDN7O95471 211 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 PIM1P11309 404 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 SRD5A1P18405 259 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 IGFBP5P24593 272 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 MCM3P25205 808 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 LOXP28300 417 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 PEX19P40855 299 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 ASCL1P50553 236 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 WNT3P56703 355 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 HMGN5P82970 282 aaKnown RBP6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 ENPEPQ07075 957 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 VEZF1Q14119 521 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 SLC5A12Q1EHB4 618 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 SLC25A52Q3SY17 297 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 CCDC14Q49A88 953 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 WIPI1Q5MNZ9 446 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 ACER2Q5QJU3 275 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 ACAD10Q6JQN1 1059 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 SLC25A25Q6KCM7 469 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 H3F3CQ6NXT2 135 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 FBXO42Q6P3S6 717 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 CNSTQ6PJW8 725 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 B3GNT6Q6ZMB0 384 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 DNM1P46Q6ZS02 220 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms