RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 C2orf73Q8N5S3 287 aaPredicted RBP17.02■□□□□ 0.32
SFXN1-212ENST00000515791 ZBTB2Q8N680 514 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 CFAP61Q8NHU2 1237 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 DENND1AQ8TEH3 1009 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 PBKQ96KB5 322 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 DPH2Q9BQC3 489 aaPredicted RBP17.02■□□□□ 0.32
SFXN1-212ENST00000515791 GALPQ9UBC7 116 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 AP1M2Q9Y6Q5 423 aa17.02■□□□□ 0.32
SFXN1-212ENST00000515791 FLNCQ14315 2725 aa17.02■□□□□ 0.31
SFXN1-212ENST00000515791 TNRC6AQ8NDV7 1962 aaKnown RBP17.01■□□□□ 0.31
SFXN1-212ENST00000515791 KRT87PA6NCN2 255 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 MAP3K7O43318 606 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 KDM1AO60341 852 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 CNOT3O75175 753 aaKnown RBP17.01■□□□□ 0.31
SFXN1-212ENST00000515791 NIPSNAP2O75323 286 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 CEACAM4O75871 244 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 OR2B3O76000 313 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 S1PR4O95977 384 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 HBQ1P09105 142 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 PTGIRP43119 386 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 TERF1P54274 439 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 EIF3BP55884 814 aaKnown RBP17.01■□□□□ 0.31
SFXN1-212ENST00000515791 CHAF1BQ13112 559 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 COLEC12Q5KU26 742 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 PAPD7Q5XG87 772 aaKnown RBP17.01■□□□□ 0.31
SFXN1-212ENST00000515791 MCUQ8NE86 351 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 HMGCLL1Q8TB92 370 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 COG1Q8WTW3 980 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 MAGOHBQ96A72 148 aaKnown RBP17.01■□□□□ 0.31
SFXN1-212ENST00000515791 TCF12Q99081 682 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 SLC22A11Q9NSA0 550 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 SNX7Q9UNH6 387 aa17.01■□□□□ 0.31
SFXN1-212ENST00000515791 RUVBL2Q9Y230 463 aaKnown RBP17.01■□□□□ 0.31
SFXN1-212ENST00000515791 ZCWPW2A0A1B0GU75 182 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 A0A1W2PPV9 198 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 ARGFXA6NJG6 315 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 KPNA5O15131 536 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 MATN4O95460 622 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 RPN2P04844 631 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 MLNP12872 115 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 ITGAXP20702 1163 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 OGNP20774 298 aaKnown RBP17■□□□□ 0.31
SFXN1-212ENST00000515791 FMO4P31512 558 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 FOXK1P85037 733 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 KLRB1Q12918 225 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 TMED2Q15363 201 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 MRNIPQ6NTE8 343 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 MRPL14Q6P1L8 145 aaKnown RBP17■□□□□ 0.31
SFXN1-212ENST00000515791 ASB18Q6ZVZ8 466 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 HOOK3Q86VS8 718 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 CILP2Q8IUL8 1156 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 SPNS2Q8IVW8 549 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 GPR135Q8IZ08 494 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 ZNF285Q96NJ3 590 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 SERPINB12Q96P63 405 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 ING2Q9H160 280 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 EURLQ9NYK6 297 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 IL1RAPL1Q9NZN1 696 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 DHCR7Q9UBM7 475 aaKnown RBP17■□□□□ 0.31
SFXN1-212ENST00000515791 PLCL2Q9UPR0 1127 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 MED16Q9Y2X0 877 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 PCDHGA9Q9Y5G4 932 aaKnown RBP17■□□□□ 0.31
SFXN1-212ENST00000515791 KLK4Q9Y5K2 254 aa17■□□□□ 0.31
SFXN1-212ENST00000515791 FAM237BA0A1B0GVD1 139 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 ZSCAN9O15535 394 aaPredicted RBP16.99■□□□□ 0.31
SFXN1-212ENST00000515791 ESR1P03372 595 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 BDKRB1P46663 353 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 ANKRD20A4Q4UJ75 823 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 CCDC137Q6PK04 289 aaKnown RBP16.99■□□□□ 0.31
SFXN1-212ENST00000515791 OTOAQ7RTW8 1153 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 SDCCAG8Q86SQ7 713 aaPredicted RBP16.99■□□□□ 0.31
SFXN1-212ENST00000515791 SLC35F6Q8N357 371 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 ZNF655Q8N720 491 aaPredicted RBP16.99■□□□□ 0.31
SFXN1-212ENST00000515791 NAT8LQ8N9F0 302 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 PROKR1Q8TCW9 393 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 ACTRT1Q8TDG2 376 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 RAD51AP1Q96B01 352 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 SLC22A18Q96BI1 424 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 SIGLEC10Q96LC7 697 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 DHRS4Q9BTZ2 278 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 KCNF1Q9H3M0 494 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 CRYL1Q9Y2S2 319 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 CCDC88CQ9P219 2028 aa16.99■□□□□ 0.31
SFXN1-212ENST00000515791 ONECUT2O95948 504 aa16.98■□□□□ 0.31
SFXN1-212ENST00000515791 F7P08709 466 aaPredicted RBP16.98■□□□□ 0.31
SFXN1-212ENST00000515791 ERGP11308 486 aa16.98■□□□□ 0.31
SFXN1-212ENST00000515791 AGXTP21549 392 aa16.98■□□□□ 0.31
SFXN1-212ENST00000515791 ATP5DP30049 168 aa16.98■□□□□ 0.31
SFXN1-212ENST00000515791 GRIA3P42263 894 aa16.98■□□□□ 0.31
SFXN1-212ENST00000515791 YBX1P67809 324 aaKnown RBP16.98■□□□□ 0.31
SFXN1-212ENST00000515791 SARNPP82979 210 aaKnown RBP16.98■□□□□ 0.31
SFXN1-212ENST00000515791 IGFBP7Q16270 282 aa16.98■□□□□ 0.31
SFXN1-212ENST00000515791 RNF187Q5TA31 235 aaPredicted RBP16.98■□□□□ 0.31
SFXN1-212ENST00000515791 C1orf189Q5VU69 101 aa16.98■□□□□ 0.31
SFXN1-212ENST00000515791 NEPROQ6NW34 567 aa16.98■□□□□ 0.31
SFXN1-212ENST00000515791 TLDC1Q6P9B6 456 aa16.98■□□□□ 0.31
SFXN1-212ENST00000515791 TAX1BP1Q86VP1 789 aa16.98■□□□□ 0.31
SFXN1-212ENST00000515791 MCATQ8IVS2 390 aaKnown RBP16.98■□□□□ 0.31
SFXN1-212ENST00000515791 OR2A1Q8NGT9 310 aa16.98■□□□□ 0.31
SFXN1-212ENST00000515791 OSBPL9Q96SU4 736 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms