RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 INO80Q9ULG1 1556 aaPredicted RBP3.04□□□□□ -1.92
HERC4-215ENST00000515753 ABCC3O15438 1527 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 SLIT1O75093 1534 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 MAP3K1Q13233 1512 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 DUOX2Q9NRD8 1548 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 NKTRP30414 1462 aaKnown RBP3.04□□□□□ -1.92
HERC4-215ENST00000515753 CAMSAP2Q08AD1 1489 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 VPS8Q8N3P4 1428 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 PLEKHG1Q9ULL1 1385 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 SMCHD1A6NHR9 2005 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 GPR75-ASB3A0A0A6YYF3 556 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 ARHGEF37A1IGU5 675 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 C1orf226A1L170 272 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 PRKNO60260 465 aaPredicted RBP3.04□□□□□ -1.92
HERC4-215ENST00000515753 TBX6O95947 436 aaPredicted RBP3.04□□□□□ -1.92
HERC4-215ENST00000515753 CFC1BP0CG36 223 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 CFC1P0CG37 223 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 P4HA1P13674 534 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 CSF2RAP15509 400 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 CCR10P46092 362 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 NPY4RP50391 375 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 MLLT10P55197 1068 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 ISL1P61371 349 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 CXCL9Q07325 125 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 DMP1Q13316 513 aaPredicted RBP3.04□□□□□ -1.92
HERC4-215ENST00000515753 KCNC3Q14003 757 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 SMU1Q2TAY7 513 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 SIRPB2Q5JXA9 342 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 RARS2Q5T160 578 aaKnown RBP3.04□□□□□ -1.92
HERC4-215ENST00000515753 ARMC4Q5T2S8 1044 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 MPP7Q5T2T1 576 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 NSUN5P2Q63ZY6 315 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 OR7E24Q6IFN5 339 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 SHQ1Q6PI26 577 aaKnown RBP3.04□□□□□ -1.92
HERC4-215ENST00000515753 SUSD1Q6UWL2 747 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 KCTD8Q6ZWB6 473 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 CATSPER4Q7RTX7 472 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 ADCK2Q7Z695 626 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 ARID3BQ8IVW6 561 aaPredicted RBP3.04□□□□□ -1.92
HERC4-215ENST00000515753 ARL6IP6Q8N6S5 226 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 PI4KAP1Q8N8J0 262 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 IQUBQ8NA54 791 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 SLC44A1Q8WWI5 657 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 MR1Q95460 341 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 PTERQ96BW5 349 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 ABHD8Q96I13 439 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 C17orf77Q96MU5 243 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 ZNF583Q96ND8 569 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 DACH2Q96NX9 599 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 EGFL8Q99944 293 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 FERMT1Q9BQL6 677 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 PIGMQ9H3S5 423 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 DDX43Q9NXZ2 648 aaKnown RBP3.04□□□□□ -1.92
HERC4-215ENST00000515753 TAAR2Q9P1P5 351 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 DNAJB9Q9UBS3 223 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 IL17BQ9UHF5 180 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 MOSPD1Q9UJG1 213 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 LEF1Q9UJU2 399 aaPredicted RBP3.04□□□□□ -1.92
HERC4-215ENST00000515753 WBP11Q9Y2W2 641 aaKnown RBP3.04□□□□□ -1.92
HERC4-215ENST00000515753 ITSN2Q9NZM3 1697 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 ARHGEF5Q12774 1597 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 VWDEQ8N2E2 1590 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 RPRD2Q5VT52 1461 aaKnown RBP3.03□□□□□ -1.92
HERC4-215ENST00000515753 SNED1Q8TER0 1413 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 SIGLEC1Q9BZZ2 1709 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 IGLV5-45A0A087WSX0 123 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 A0A1W2PR77 199 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 LNP1A1A4G5 178 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 RTCAO00442 366 aaKnown RBP3.03□□□□□ -1.92
HERC4-215ENST00000515753 IPO8O15397 1037 aaKnown RBP3.03□□□□□ -1.92
HERC4-215ENST00000515753 EDIL3O43854 480 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 GPC4O75487 556 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 PNPP00491 289 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 HIST1H2ABP04908 130 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 INHBAP08476 426 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 MMP9P14780 707 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 HIST1H2ADP20671 130 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 DCTP40126 519 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 ARCN1P48444 511 aaKnown RBP3.03□□□□□ -1.92
HERC4-215ENST00000515753 NR2C2P49116 596 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 ARSEP51690 589 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 GPR143P51810 404 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 BMXP51813 675 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 CAPZA1P52907 286 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 KRTAP10-3P60369 221 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 SPOCK1Q08629 439 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 GAGE2BQ13066 116 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 PTK6Q13882 451 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 TUBB2AQ13885 445 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 NFE2L1Q14494 772 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 MEP1BQ16820 701 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 LETM2Q2VYF4 491 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 GAGE2EQ4V326 116 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 C14orf177Q52M58 125 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 GLRA4Q5JXX5 417 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 LRIF1Q5T3J3 769 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 DHRS7BQ6IAN0 325 aaPredicted RBP3.03□□□□□ -1.92
HERC4-215ENST00000515753 GAGE2AQ6NT46 116 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 FAM171BQ6P995 826 aa3.03□□□□□ -1.92
HERC4-215ENST00000515753 LINC00696Q6ZRV3 163 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms