RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 ZNRF4Q8WWF5 429 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 RSRC1Q96IZ7 334 aaKnown RBP3.37□□□□□ -1.87
LINC01088-211ENST00000515597 C16orf70Q9BSU1 422 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 LAT2Q9GZY6 243 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 SPATC1LQ9H0A9 340 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 KCNK15Q9H427 330 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 GIMAP4Q9NUV9 329 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 RHCGQ9UBD6 479 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 PLAGL1Q9UM63 463 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 VWDEQ8N2E2 1590 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 LRP6O75581 1613 aa3.37□□□□□ -1.87
LINC01088-211ENST00000515597 WRNQ14191 1432 aaPredicted RBP eCLIP3.36□□□□□ -1.87
LINC01088-211ENST00000515597 ATP10BO94823 1461 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 RAPGEF2Q9Y4G8 1499 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 OR2A25A4D2G3 310 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 HMGB1P1B2RPK0 211 aaPredicted RBP3.36□□□□□ -1.87
LINC01088-211ENST00000515597 KLF11O14901 512 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 SSX4O60224 188 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 PRAMEF11O60813 436 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 PRKRAO75569 313 aaKnown RBP3.36□□□□□ -1.87
LINC01088-211ENST00000515597 GFPT2O94808 682 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 GATA1P15976 413 aaPredicted RBP3.36□□□□□ -1.87
LINC01088-211ENST00000515597 CA4P22748 312 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 EIF2DP41214 584 aaKnown RBP3.36□□□□□ -1.87
LINC01088-211ENST00000515597 LMAN1P49257 510 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 STAT2P52630 851 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 CX3CL1P78423 397 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 NR1D2Q14995 579 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 MDH1BQ5I0G3 518 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 BSPRYQ5W0U4 402 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 ABCA7Q8IZY2 2146 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 MARVELD2Q8N4S9 558 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 MAPKAPK5-AS1Q8N8E1 139 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 PAPD5Q8NDF8 572 aaKnown RBP3.36□□□□□ -1.87
LINC01088-211ENST00000515597 RNF128Q8TEB7 428 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 DYRK2Q92630 601 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 NEK1Q96PY6 1258 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 OR6C1Q96RD1 312 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 PAFAH2Q99487 392 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 SYT15Q9BQS2 421 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 TRAF4Q9BUZ4 470 aaPredicted RBP3.36□□□□□ -1.87
LINC01088-211ENST00000515597 FGFBP2Q9BYJ0 223 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 PITPNM3Q9BZ71 974 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 MMP27Q9H306 513 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 CCDC177Q9NQR7 707 aaPredicted RBP3.36□□□□□ -1.87
LINC01088-211ENST00000515597 ZNF701Q9NV72 531 aaPredicted RBP3.36□□□□□ -1.87
LINC01088-211ENST00000515597 MRPL15Q9P015 296 aaKnown RBP3.36□□□□□ -1.87
LINC01088-211ENST00000515597 LARSQ9P2J5 1176 aaKnown RBP3.36□□□□□ -1.87
LINC01088-211ENST00000515597 ZDHHC2Q9UIJ5 367 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 PTRH2Q9Y3E5 179 aaKnown RBP3.36□□□□□ -1.87
LINC01088-211ENST00000515597 ABCA8O94911 1581 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 HECW1Q76N89 1606 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 ABCA9Q8IUA7 1624 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 TRAPPC8Q9Y2L5 1435 aa3.36□□□□□ -1.87
LINC01088-211ENST00000515597 FANCAO15360 1455 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 NEO1Q92859 1461 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 SHANK2Q9UPX8 1470 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 NEURL4Q96JN8 1562 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 ADAMTS9Q9P2N4 1935 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 IGLV7-46A0A075B6I9 117 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 A0A1W2PNU3 283 aaPredicted RBP3.35□□□□□ -1.87
LINC01088-211ENST00000515597 E9PQ18 207 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 PAPSS1O43252 624 aaPredicted RBP3.35□□□□□ -1.87
LINC01088-211ENST00000515597 TSPAN1O60635 241 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 CREG1O75629 220 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 MOCS3O95396 460 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 GPIP06744 558 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 CA6P23280 308 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 NKX2-1P43699 371 aaPredicted RBP3.35□□□□□ -1.87
LINC01088-211ENST00000515597 B3GALT5-AS1P59052 145 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 STK4Q13043 487 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 ENPP2Q13822 863 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 KRTAP13-3Q3SY46 172 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 IGSF11Q5DX21 431 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 XKR6Q5GH73 641 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 BRINP3Q76B58 766 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 LDB1Q86U70 411 aaPredicted RBP3.35□□□□□ -1.87
LINC01088-211ENST00000515597 AACSQ86V21 672 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 KBTBD6Q86V97 674 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 AFAP1Q8N556 730 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 APPL2Q8NEU8 664 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 MOSPD2Q8NHP6 518 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 PRPF31Q8WWY3 499 aaKnown RBP3.35□□□□□ -1.87
LINC01088-211ENST00000515597 SUSD6Q92537 303 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 MAGED4Q96JG8 741 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 FNBP1Q96RU3 617 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 NUDT16L1Q9BRJ7 211 aaKnown RBP3.35□□□□□ -1.87
LINC01088-211ENST00000515597 BTBD10Q9BSF8 475 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 MRPL1Q9BYD6 325 aaKnown RBP3.35□□□□□ -1.87
LINC01088-211ENST00000515597 P2RY12Q9H244 342 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 A4GALTQ9NPC4 353 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 SDR39U1Q9NRG7 319 aaPredicted RBP3.35□□□□□ -1.87
LINC01088-211ENST00000515597 TAB2Q9NYJ8 693 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 PCDHGB4Q9UN71 923 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 GRIP1Q9Y3R0 1128 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 RIPK3Q9Y572 518 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.35□□□□□ -1.871e-7■□□□□ 11.2
LINC01088-211ENST00000515597 SNX8Q9Y5X2 465 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 ZNF541Q9H0D2 1346 aa3.35□□□□□ -1.87
LINC01088-211ENST00000515597 AKNAQ7Z591 1439 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms