RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 UMODL1-AS1Q8N2C9 162 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 DUS3LQ96G46 650 aaKnown RBP13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 NEURL2Q9BR09 285 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 ATG10Q9H0Y0 220 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 POU2F3Q9UKI9 436 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 SPO11Q9Y5K1 396 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 TBKBP1A7MCY6 615 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 F8W810 466 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 ZNF197O14709 1029 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 FPGTO14772 594 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 PRAMEF1O95521 474 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 ATP5C1P36542 298 aaKnown RBP13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 ELP6Q0PNE2 266 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 SERPINA9Q86WD7 417 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 NELL1Q92832 810 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 ZNF641Q96N77 438 aaPredicted RBP13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 AASDHPPTQ9NRN7 309 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 RAPGEFL1Q9UHV5 662 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 ZNF221Q9UK13 617 aa13.59□□□□□ -0.23
TSPAN17-208ENST00000514705 RBM47A0AV96 593 aaKnown RBP13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 C5orf58C9J3I9 102 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 SUV39H1O43463 412 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 ESR1P03372 595 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 FSHRP23945 695 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 SPIBQ01892 262 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 DUSP4Q13115 394 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 PLEKHG6Q3KR16 790 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 MFSD4BQ5TF39 518 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 LINC01465Q8N7H1 131 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 DPF3Q92784 378 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 OTULINQ96BN8 352 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 ZNF382Q96SR6 550 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 FARSBQ9NSD9 589 aaKnown RBP13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 UTS2RQ9UKP6 389 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 SNX6Q9UNH7 406 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 H3BN98 237 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 TSC22D2O75157 780 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 CTSKP43235 329 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 PURAQ00577 322 aaKnown RBP13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 THOC7Q6I9Y2 204 aaKnown RBP13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 SCD5Q86SK9 330 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 ZNF598Q86UK7 904 aaKnown RBP13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 PIANPQ8IYJ0 282 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 CADM3Q8N126 398 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 MINDY2Q8NBR6 621 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 NETO1Q8TDF5 533 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 RDH12Q96NR8 316 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 YME1L1Q96TA2 773 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 CORO1BQ9BR76 489 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 KLHL3Q9UH77 587 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 ARIH1Q9Y4X5 557 aaPredicted RBP13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 SAGE2PA6NJ88 616 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 NT5C1B-RDH14C9J2C7 533 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 NPPAP01160 153 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 ALPIP09923 528 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 PABPC1P11940 636 aaKnown RBP13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 TCEA1P23193 301 aaKnown RBP13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 PGFP49763 221 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 RPS3AP61247 264 aaKnown RBP13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 NFKB2Q00653 900 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 GRIK2Q13002 908 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 SERINC3Q13530 473 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 USP39Q53GS9 565 aaKnown RBP13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 PYCR3Q53H96 274 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 DCP2Q8IU60 420 aaKnown RBP13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 HHIPL1Q96JK4 782 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 OSBPL10Q9BXB5 764 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 CCSER2Q9H7U1 834 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 TEKT2Q9UIF3 430 aa13.58□□□□□ -0.24
TSPAN17-208ENST00000514705 ZNF865P0CJ78 1059 aaPredicted RBP13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 GRK3P35626 688 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 CHI3L1P36222 383 aaPredicted RBP13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 PTGER3P43115 390 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 RPL34P49207 117 aaKnown RBP13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 ZFP69Q49AA0 526 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 ATXN7L2Q5T6C5 722 aaPredicted RBP13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 AGMOQ6ZNB7 445 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 Q8N9G6 341 aaPredicted RBP13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 MTERF3Q96E29 417 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 DSN1Q9H410 356 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 CLDN9O95484 217 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 HPRP00739 348 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 VIPP01282 170 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 OPN1SWP03999 348 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 ITGB1P05556 798 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 GRSF1Q12849 480 aaKnown RBP eCLIP13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 PTPRRQ15256 657 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 RAB41Q5JT25 222 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 RGL4Q8IZJ4 473 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 GLB1L3Q8NCI6 653 aaPredicted RBP13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 OR8J3Q8NGG0 315 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 VPS35Q96QK1 796 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 ATP13A3Q9H7F0 1226 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 ARNT2Q9HBZ2 717 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 TMEM248Q9NWD8 314 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 PTPRFP10586 1907 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 RPS17P08708 135 aaKnown RBP13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 BMP4P12644 408 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 PFKLP17858 780 aa13.57□□□□□ -0.24
TSPAN17-208ENST00000514705 RPIAP49247 311 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms