RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 ZFP36L2P47974 494 aaKnown RBP12.48□□□□□ -0.41
PVT1-203ENST00000513868 CLDN2P57739 230 aa12.48□□□□□ -0.41
PVT1-203ENST00000513868 ERVK-8P63133 956 aa12.48□□□□□ -0.41
PVT1-203ENST00000513868 GAS6Q14393 721 aa12.48□□□□□ -0.41
PVT1-203ENST00000513868 CPSF6Q16630 551 aaKnown RBP eCLIP12.48□□□□□ -0.41
PVT1-203ENST00000513868 PYCR3Q53H96 274 aa12.48□□□□□ -0.41
PVT1-203ENST00000513868 PHC3Q8NDX5 983 aa12.48□□□□□ -0.41
PVT1-203ENST00000513868 DENND6BQ8NEG7 585 aa12.48□□□□□ -0.41
PVT1-203ENST00000513868 OR9A1PQ8NGU1 263 aa12.48□□□□□ -0.41
PVT1-203ENST00000513868 BMFQ96LC9 184 aa12.48□□□□□ -0.41
PVT1-203ENST00000513868 THTPAQ9BU02 230 aa12.48□□□□□ -0.41
PVT1-203ENST00000513868 BTBD1Q9H0C5 482 aa12.48□□□□□ -0.41
PVT1-203ENST00000513868 DENND2DQ9H6A0 471 aaPredicted RBP12.48□□□□□ -0.41
PVT1-203ENST00000513868 RMI1Q9H9A7 625 aa12.48□□□□□ -0.41
PVT1-203ENST00000513868 EBF2Q9HAK2 575 aa12.48□□□□□ -0.41
PVT1-203ENST00000513868 MRPL40Q9NQ50 206 aaKnown RBP12.48□□□□□ -0.41
PVT1-203ENST00000513868 ZNF490Q9ULM2 529 aaPredicted RBP12.48□□□□□ -0.41
PVT1-203ENST00000513868 PSMD13Q9UNM6 376 aa12.48□□□□□ -0.41
PVT1-203ENST00000513868 KRBA1A5PL33 1030 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 KLHL33A6NCF5 533 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 LATO43561 262 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 NUDT2P50583 147 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 IRX1P78414 480 aaPredicted RBP12.47□□□□□ -0.41
PVT1-203ENST00000513868 EMX2Q04743 252 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 GRIK2Q13002 908 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 CHIT1Q13231 466 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 E2F2Q14209 437 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 ATP6AP1LQ52LC2 224 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 RFTN2Q52LD8 501 aaPredicted RBP12.47□□□□□ -0.41
PVT1-203ENST00000513868 CAPRIN2Q6IMN6 1127 aaKnown RBP12.47□□□□□ -0.41
PVT1-203ENST00000513868 PGM2L1Q6PCE3 622 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 SYT13Q7L8C5 426 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 CHST15Q7LFX5 561 aaPredicted RBP12.47□□□□□ -0.41
PVT1-203ENST00000513868 MYLK4Q86YV6 388 aaPredicted RBP12.47□□□□□ -0.41
PVT1-203ENST00000513868 SCUBE1Q8IWY4 988 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 PARP9Q8IXQ6 854 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 ULK2Q8IYT8 1036 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 DEFB107AQ8IZN7 70 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 DSELQ8IZU8 1212 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 MIER2Q8N344 545 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 LMNTD1Q8N9Z9 388 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 KYQ8NBH2 561 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 OR5AR1Q8NGP9 310 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 TFGQ92734 400 aaPredicted RBP12.47□□□□□ -0.41
PVT1-203ENST00000513868 MED8Q96G25 268 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 SLC45A3Q96JT2 553 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 TEX37Q96LM6 180 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 NPAS2Q99743 824 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 TIMM29Q9BSF4 260 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 C1orf50Q9BV19 199 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 SGPP1Q9BX95 441 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 BRINP2Q9C0B6 783 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 ZMYND15Q9H091 742 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 RASSF4Q9H2L5 321 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 LMAN1LQ9HAT1 526 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 SGK2Q9HBY8 427 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 SLC52A3Q9NQ40 469 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 SUFUQ9UMX1 484 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 CA5BQ9Y2D0 317 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 WDR37Q9Y2I8 494 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 PLEKHM1Q9Y4G2 1056 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 EML5Q05BV3 1969 aa12.47□□□□□ -0.41
PVT1-203ENST00000513868 LRRC72A6NJI9 287 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 E7ENX8 843 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 E7EQ34 232 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 H0Y8X5 98 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 SLC28A1O00337 649 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 UGDHO60701 494 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 ATP6V1G2O95670 118 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 PDYNP01213 254 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 SNRPB2P08579 225 aaKnown RBP12.46□□□□□ -0.41
PVT1-203ENST00000513868 ACP5P13686 325 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 JUPP14923 745 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 NPPBP16860 134 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 DGKEP52429 567 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 NME5P56597 212 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 STX1BP61266 288 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 TAP2Q03519 686 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 PRKCQQ04759 706 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 LRP8Q14114 963 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 MAPRE2Q15555 327 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 ZRSR2Q15696 482 aaKnown RBP12.46□□□□□ -0.41
PVT1-203ENST00000513868 KIF19Q2TAC6 998 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 AP5B1Q2VPB7 878 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 TPRG1LQ5T0D9 272 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 LIPJQ5W064 366 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 PACS2Q86VP3 889 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 RGL4Q8IZJ4 473 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 SYNPOQ8N3V7 929 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 FNDC5Q8NAU1 212 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 WDR60Q8WVS4 1066 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 MTFMTQ96DP5 389 aaKnown RBP12.46□□□□□ -0.41
PVT1-203ENST00000513868 MENTQ9BUN1 341 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 ACPTQ9BZG2 426 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 EFCAB1Q9HAE3 211 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 FGF22Q9HCT0 170 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 SLC7A8Q9UHI5 535 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 ASF1AQ9Y294 204 aa12.46□□□□□ -0.41
PVT1-203ENST00000513868 TDRD6O60522 2096 aaKnown RBP12.46□□□□□ -0.41
PVT1-203ENST00000513868 SERTM1A2A2V5 107 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms