RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 RBPJQ06330 500 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 FOXD4Q12950 439 aaPredicted RBP10.7□□□□□ -0.7
RNF4-218ENST00000513284 ITGA9Q13797 1035 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 ZDHHC20Q5W0Z9 365 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 SARM1Q6SZW1 724 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 BZW1Q7L1Q6 419 aaKnown RBP10.7□□□□□ -0.7
RNF4-218ENST00000513284 VSIG1Q86XK7 387 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 MCATQ8IVS2 390 aaKnown RBP10.7□□□□□ -0.7
RNF4-218ENST00000513284 KBTBD2Q8IY47 623 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 PLD5Q8N7P1 536 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 HM13Q8TCT9 377 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 CPLX3Q8WVH0 158 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 TFGQ92734 400 aaPredicted RBP10.7□□□□□ -0.7
RNF4-218ENST00000513284 DMRTA2Q96SC8 542 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.7□□□□□ -0.7
RNF4-218ENST00000513284 TRABDQ9H4I3 376 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 MVB12BQ9H7P6 319 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 COG4Q9H9E3 785 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 NPDC1Q9NQX5 325 aaPredicted RBP10.7□□□□□ -0.7
RNF4-218ENST00000513284 ZNHIT6Q9NWK9 470 aaKnown RBP10.7□□□□□ -0.7
RNF4-218ENST00000513284 GTF3C1Q12789 2109 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 SYCE3A1L190 88 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 TMEM200CA6NKL6 621 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 ZNF487B1APH4 448 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 APOL1O14791 398 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 DSCR3O14972 297 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 PRAMEF2O60811 474 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 USP1O94782 785 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 CHRM5P08912 532 aaPredicted RBP10.69□□□□□ -0.7
RNF4-218ENST00000513284 TPM1P09493 284 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 COX6A1P12074 109 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 CD151P48509 253 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 PRLHRP49683 370 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 CASP6P55212 293 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 WNT3AP56704 352 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 XIAPP98170 497 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 KLC1Q07866 573 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 AP1B1Q10567 949 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 PDK1Q15118 436 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 TEX44Q53QW1 395 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 DOLPP1Q86YN1 238 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 SLC25A41Q8N5S1 370 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 METTL27Q8N6F8 245 aaPredicted RBP10.69□□□□□ -0.7
RNF4-218ENST00000513284 OR5AR1Q8NGP9 310 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 THAP3Q8WTV1 239 aaPredicted RBP10.69□□□□□ -0.7
RNF4-218ENST00000513284 RAPGEF5Q92565 580 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 RNF157Q96PX1 679 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 HGH1Q9BTY7 390 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 LIME1Q9H400 295 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 GPAMQ9HCL2 828 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 ENAMQ9NRM1 1142 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 CCM2LQ9NUG4 571 aaPredicted RBP10.69□□□□□ -0.7
RNF4-218ENST00000513284 MRPS2Q9Y399 296 aaKnown RBP10.69□□□□□ -0.7
RNF4-218ENST00000513284 ABCA4P78363 2273 aa10.69□□□□□ -0.7
RNF4-218ENST00000513284 HCFC1P51610 2035 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 CPAMD8Q8IZJ3 1885 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 A0A0J9YY10 115 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 A0A1W2PQ72 361 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 LRRD1A4D1F6 860 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 FANCGO15287 622 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 ZRANB2O95218 330 aaKnown RBP eCLIP10.68□□□□□ -0.7
RNF4-218ENST00000513284 BMP10O95393 424 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 PRAMEF1O95521 474 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 EPOP01588 193 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 SERPINA7P05543 415 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 PYGMP11217 842 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 PIM1P11309 404 aaPredicted RBP10.68□□□□□ -0.7
RNF4-218ENST00000513284 ACPPP15309 386 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 KDELR1P24390 212 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 GRIA3P42263 894 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 ARSFP54793 590 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 CACNG1Q06432 222 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 LTBQ06643 244 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 TFF3Q07654 80 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 OLIG2Q13516 323 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 TRIM14Q14142 442 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 SLC18A3Q16572 532 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 NPNTQ6UXI9 565 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 C3P1Q6ZMU1 363 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 NDUFAF7Q7L592 441 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 FGD2Q7Z6J4 655 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 PRIMA1Q86XR5 153 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 DNAAF3Q8N9W5 541 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 LMNTD1Q8N9Z9 388 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 CCDC110Q8TBZ0 833 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 STT3BQ8TCJ2 826 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 BLOC1S5Q8TDH9 187 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 AGAP11Q8TF27 550 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 MRGPRX2Q96LB1 330 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 TEKT5Q96M29 485 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 GPR137Q96N19 417 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 ZNF285Q96NJ3 590 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 OLFM3Q96PB7 478 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 SMR3AQ99954 134 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 CRB3Q9BUF7 120 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 RNF32Q9H0A6 362 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 FAM96AQ9H5X1 160 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 ASB8Q9H765 288 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 CUTCQ9NTM9 273 aa10.68□□□□□ -0.7
RNF4-218ENST00000513284 IRAK4Q9NWZ3 460 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms