RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 GLOD4Q9HC38 313 aa11.08□□□□□ -0.64
RNF4-216ENST00000511859 AIPL1Q9NZN9 384 aa11.08□□□□□ -0.64
RNF4-216ENST00000511859 OR6C2Q9NZP2 312 aa11.08□□□□□ -0.64
RNF4-216ENST00000511859 FAM153AQ9UHL3 310 aa11.08□□□□□ -0.64
RNF4-216ENST00000511859 NSG1A0A0A6YYJ2 146 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 TMEM200CA6NKL6 621 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 STX7O15400 261 aaKnown RBP11.07□□□□□ -0.64
RNF4-216ENST00000511859 PRAMEF1O95521 474 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 WDPCPO95876 746 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 SERPINA7P05543 415 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 TPM3P06753 285 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 CHRM5P08912 532 aaPredicted RBP11.07□□□□□ -0.64
RNF4-216ENST00000511859 FOSL1P15407 271 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 KLK2P20151 261 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 DNAJA1P31689 397 aaKnown RBP11.07□□□□□ -0.64
RNF4-216ENST00000511859 NSG1P42857 185 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 RAB28P51157 221 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 ZNF75DP51815 510 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 IST1P53990 364 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 AP2B1P63010 937 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 FAM214AQ32MH5 1076 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 TCTE1Q5JU00 501 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 SIRPB2Q5JXA9 342 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 RIPOR1Q6ZS17 1223 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 COX15Q7KZN9 410 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 MCATQ8IVS2 390 aaKnown RBP11.07□□□□□ -0.64
RNF4-216ENST00000511859 EID3Q8N140 333 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 FLVCR1-AS1Q8TAF5 88 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 BLOC1S5Q8TDH9 187 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 PHF10Q8WUB8 498 aaKnown RBP11.07□□□□□ -0.64
RNF4-216ENST00000511859 CRB3Q9BUF7 120 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 ASB8Q9H765 288 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 COG4Q9H9E3 785 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 GRPEL1Q9HAV7 217 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 ENAMQ9NRM1 1142 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 CUTCQ9NTM9 273 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 UBP1Q9NZI7 540 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 ICKQ9UPZ9 632 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 PCDHGB6Q9Y5F9 930 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 HEY1Q9Y5J3 304 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 CSPG4Q6UVK1 2322 aa11.07□□□□□ -0.64
RNF4-216ENST00000511859 OR5H15A6NDH6 313 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 LRRC53A6NM62 1247 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 AGAP14A8MT82 685 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 CFAP99D6REC4 459 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 PPP1R12AO14974 1030 aaPredicted RBP11.06□□□□□ -0.64
RNF4-216ENST00000511859 BUD23O43709 281 aaKnown RBP11.06□□□□□ -0.64
RNF4-216ENST00000511859 WFS1O76024 890 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 SRP72O76094 671 aaKnown RBP11.06□□□□□ -0.64
RNF4-216ENST00000511859 ATP1B2P14415 290 aaPredicted RBP11.06□□□□□ -0.64
RNF4-216ENST00000511859 PDHA2P29803 388 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 WNT3AP56704 352 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 OCA2Q04671 838 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 KLC1Q07866 573 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 KLHL30Q0D2K2 578 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 GRM7Q14831 915 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 KIR2DS3Q14952 304 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 SLC1A5Q15758 541 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 SIRT6Q8N6T7 355 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 PLD5Q8N7P1 536 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 NAT14Q8WUY8 206 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 NINJ1Q92982 152 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 TEKT5Q96M29 485 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 TMEM121Q9BTD3 319 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 HGH1Q9BTY7 390 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 VPS37BQ9H9H4 285 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 SPHK1Q9NYA1 384 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 COQ3Q9NZJ6 369 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 CTSFQ9UBX1 484 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 POLG2Q9UHN1 485 aa11.06□□□□□ -0.64
RNF4-216ENST00000511859 C2orf81A6NN90 581 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 ISM1B1AKI9 464 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 E9PLN8 166 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 KDM1AO60341 852 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 F10P00742 488 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 UQCRHP07919 91 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 GSTM1P09488 218 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 ZGLP1P0C6A0 271 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 ICAM2P13598 275 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 IGFBP2P18065 325 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 KDELR1P24390 212 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 CXCR2P25025 360 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 GJC1P36383 396 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 GSTM4Q03013 218 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 SRSF11Q05519 484 aaKnown RBP11.05□□□□□ -0.64
RNF4-216ENST00000511859 NOMO1Q15155 1222 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 ZNF658BQ4V348 819 aaPredicted RBP11.05□□□□□ -0.64
RNF4-216ENST00000511859 ZC3H12BQ5HYM0 836 aaKnown RBP11.05□□□□□ -0.64
RNF4-216ENST00000511859 FAM182AQ5T1J6 154 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 CES4AQ5XG92 561 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 HIBCHQ6NVY1 386 aaPredicted RBP11.05□□□□□ -0.64
RNF4-216ENST00000511859 NLRP9Q7RTR0 991 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 VSTM4Q8IW00 320 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 TBC1D21Q8IYX1 336 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 SLC25A41Q8N5S1 370 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 STT3BQ8TCJ2 826 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.05□□□□□ -0.64
RNF4-216ENST00000511859 MIEF2Q96C03 454 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 ULK4Q96C45 1275 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 GPR137Q96N19 417 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms