RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 PANK2Q9BZ23 570 aa3.15□□□□□ -1.91
TRAPPC11-207ENST00000511409 FZD8Q9H461 694 aa3.15□□□□□ -1.91
TRAPPC11-207ENST00000511409 GRPEL1Q9HAV7 217 aa3.15□□□□□ -1.91
TRAPPC11-207ENST00000511409 CDH20Q9HBT6 801 aa3.15□□□□□ -1.91
TRAPPC11-207ENST00000511409 XAB2Q9HCS7 855 aaKnown RBP3.15□□□□□ -1.91
TRAPPC11-207ENST00000511409 SH3GLB2Q9NR46 395 aa3.15□□□□□ -1.91
TRAPPC11-207ENST00000511409 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC11-207ENST00000511409 LRWD1Q9UFC0 647 aa3.15□□□□□ -1.91
TRAPPC11-207ENST00000511409 POLLQ9UGP5 575 aa3.15□□□□□ -1.91
TRAPPC11-207ENST00000511409 ZDHHC2Q9UIJ5 367 aa3.15□□□□□ -1.91
TRAPPC11-207ENST00000511409 RIPK3Q9Y572 518 aa3.15□□□□□ -1.91
TRAPPC11-207ENST00000511409 A0A0G2JLW4 131 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 LOC101059948A0A1B0GTJ6 334 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 ANXA2P2A6NMY6 339 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 TSHBP01222 138 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 IGHV4-38-2P0DP08 117 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 IRF2P14316 349 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 MYL6BP14649 208 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 LIFP15018 202 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 IFNAR1P17181 557 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 CA4P22748 312 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 SP100P23497 879 aaPredicted RBP3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 DCTP40126 519 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 RPL21P46778 160 aaKnown RBP3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 LIMK1P53667 647 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 LINC01547P58512 204 aaPredicted RBP3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 IRX6P78412 446 aaPredicted RBP3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 ZNF273Q14593 569 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 CA9Q16790 459 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 ITPRIPL2Q3MIP1 535 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 KLHL22Q53GT1 634 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 CAVIN1Q6NZI2 390 aaKnown RBP3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 TRAT1Q6PIZ9 186 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 CEACAM20Q6UY09 585 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 RBMS3Q6XE24 437 aaKnown RBP3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 SPATA21Q7Z572 469 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 KRT77Q7Z794 578 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 SMIM29Q86T20 159 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 TRPT1Q86TN4 253 aaKnown RBP3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 RTN4RL2Q86UN3 420 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 LGI2Q8N0V4 545 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 EID3Q8N140 333 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 RYBPQ8N488 228 aaPredicted RBP3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 ZNF383Q8NA42 475 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 VANGL1Q8TAA9 524 aaPredicted RBP3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 GRHL3Q8TE85 626 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 FCAMRQ8WWV6 532 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 RAD9AQ99638 391 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 FN3KQ9H479 309 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 ZWILCHQ9H900 591 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 CHCHD3Q9NX63 227 aaKnown RBP3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 SPHK1Q9NYA1 384 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 TXNDC16Q9P2K2 825 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 ACAD8Q9UKU7 415 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 LRP12Q9Y561 859 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 POMT1Q9Y6A1 747 aa3.14□□□□□ -1.91
TRAPPC11-207ENST00000511409 IGLV9-49A0A0B4J1Y8 123 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 TRAV34A0A0B4J273 112 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 A0A1W2PN81 502 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 SMIM1B2RUZ4 78 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 WDR46O15213 610 aaKnown RBP3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 RPS6KA5O75582 802 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 MOCS3O95396 460 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 HSP90AB1P08238 724 aaKnown RBP3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 PAX1P15863 534 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 CDH3P22223 829 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 TCEA1P23193 301 aaKnown RBP3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 ACAT1P24752 427 aaKnown RBP3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 CDC25CP30307 473 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 PTGER4P35408 488 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 CHRNA7P36544 502 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 CRKLP46109 303 aaKnown RBP3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 BMXP51813 675 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 UBASH3AP57075 661 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 MAT1AQ00266 395 aaKnown RBP3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 ITGA7Q13683 1181 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 RRS1Q15050 365 aaKnown RBP3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 ZC2HC1CQ53FD0 456 aaPredicted RBP3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 ARHGEF16Q5VV41 709 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 SLC35E4Q6ICL7 350 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 ENPP7Q6UWV6 458 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 NUDT13Q86X67 352 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 FAM219AQ8IW50 185 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 DCUN1D3Q8IWE4 304 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 MMD2Q8IY49 270 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 CNBD1Q8NA66 436 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 KLHDC9Q8NEP7 349 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 OR4K1Q8NGD4 311 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 OR10V1Q8NGI7 309 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 DEPDC1BQ8WUY9 529 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 PHLDA1Q8WV24 401 aaPredicted RBP3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 KCNE4Q8WWG9 221 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 PROX1Q92786 737 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 HES6Q96HZ4 224 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 LRRC3BQ96PB8 259 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 CITED2Q99967 270 aaPredicted RBP3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 THUMPD3Q9BV44 507 aaKnown RBP3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 LAT2Q9GZY6 243 aa3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 ZNF701Q9NV72 531 aaPredicted RBP3.13□□□□□ -1.91
TRAPPC11-207ENST00000511409 INTS10Q9NVR2 710 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms