RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 SIDT2Q8NBJ9 832 aaKnown RBP16.69■□□□□ 0.26
CLDND1-221ENST00000510541 KCNE4Q8WWG9 221 aa16.69■□□□□ 0.26
CLDND1-221ENST00000510541 ANKMY1Q9P2S6 941 aa16.69■□□□□ 0.26
CLDND1-221ENST00000510541 PILRAQ9UKJ1 303 aa16.69■□□□□ 0.26
CLDND1-221ENST00000510541 RAXQ9Y2V3 346 aa16.69■□□□□ 0.26
CLDND1-221ENST00000510541 CACNA1BQ00975 2339 aa16.69■□□□□ 0.26
CLDND1-221ENST00000510541 PTPRQQ9UMZ3 2332 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 A0A0J9YY10 115 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 A8MU76 341 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 ARHGEF33A8MVX0 844 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 DLGAP3O95886 979 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 MT-ND3P03897 115 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 ENO2P09104 434 aaPredicted RBP16.68■□□□□ 0.26
CLDND1-221ENST00000510541 UGT2B7P16662 529 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 CDH3P22223 829 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 MAP4P27816 1152 aaKnown RBP16.68■□□□□ 0.26
CLDND1-221ENST00000510541 ECHS1P30084 290 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 PPM1FP49593 454 aaPredicted RBP16.68■□□□□ 0.26
CLDND1-221ENST00000510541 CDKN2DP55273 166 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 AP1S2P56377 157 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 PPP1CAP62136 330 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 CRTC2Q53ET0 693 aaPredicted RBP16.68■□□□□ 0.26
CLDND1-221ENST00000510541 SNAP47Q5SQN1 464 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 HP1BP3Q5SSJ5 553 aaPredicted RBP16.68■□□□□ 0.26
CLDND1-221ENST00000510541 PAQR3Q6TCH7 311 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 STRA8Q7Z7C7 330 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 PPP1R3BQ86XI6 285 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 FAM129CQ86XR2 697 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 NKAPQ8N5F7 415 aaKnown RBP16.68■□□□□ 0.26
CLDND1-221ENST00000510541 DENND1AQ8TEH3 1009 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 VPS39Q96JC1 886 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 FMO2Q99518 471 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 GPR22Q99680 433 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 FGF21Q9NSA1 209 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 INTS7Q9NVH2 962 aaKnown RBP16.68■□□□□ 0.26
CLDND1-221ENST00000510541 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.68■□□□□ 0.26
CLDND1-221ENST00000510541 SLC39A10Q9ULF5 831 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 PCDHB3Q9Y5E6 796 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 PSAT1Q9Y617 370 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 NFS1Q9Y697 457 aa16.68■□□□□ 0.26
CLDND1-221ENST00000510541 LAMA5O15230 3695 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 WISP3O95389 354 aaPredicted RBP16.67■□□□□ 0.26
CLDND1-221ENST00000510541 RECKO95980 971 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 ZNF37AP17032 561 aaPredicted RBP16.67■□□□□ 0.26
CLDND1-221ENST00000510541 OAS2P29728 719 aaKnown RBP16.67■□□□□ 0.26
CLDND1-221ENST00000510541 PHBP35232 272 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 SLC26A3P40879 764 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 MAPK10P53779 464 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 TLE3Q04726 772 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 ABHD18Q0P651 414 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 CLN3Q13286 438 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 SLMAPQ14BN4 828 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 RBM20Q5T481 1227 aaKnown RBP16.67■□□□□ 0.26
CLDND1-221ENST00000510541 GRTP1Q5TC63 336 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 SPACA3Q8IXA5 215 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 IFT20Q8IY31 132 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 MCOLN3Q8TDD5 553 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 SMPDL3AQ92484 453 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 ZNF501Q96CX3 271 aaPredicted RBP16.67■□□□□ 0.26
CLDND1-221ENST00000510541 RBBP8Q99708 897 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 EFHD1Q9BUP0 239 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 PARVBQ9HBI1 364 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 SMYD2Q9NRG4 433 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 FOXJ2Q9P0K8 574 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 KLHL3Q9UH77 587 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 RARRES3Q9UL19 164 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 TDRKHQ9Y2W6 561 aaKnown RBP16.67■□□□□ 0.26
CLDND1-221ENST00000510541 SDK2Q58EX2 2172 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 CELSR3Q9NYQ7 3312 aa16.67■□□□□ 0.26
CLDND1-221ENST00000510541 ESYT3A0FGR9 886 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 GSAPA4D1B5 854 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 FOLR1P15328 257 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 CCND1P24385 295 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 HRH2P25021 359 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 PEBP1P30086 187 aaKnown RBP16.66■□□□□ 0.26
CLDND1-221ENST00000510541 SPRP35270 261 aaPredicted RBP16.66■□□□□ 0.26
CLDND1-221ENST00000510541 GABRA4P48169 554 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 CDKL1Q00532 357 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 PDAP1Q13442 181 aaKnown RBP16.66■□□□□ 0.26
CLDND1-221ENST00000510541 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.66■□□□□ 0.26
CLDND1-221ENST00000510541 CDKL4Q5MAI5 379 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 BROXQ5VW32 411 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 ZNF517Q6ZMY9 492 aaPredicted RBP16.66■□□□□ 0.26
CLDND1-221ENST00000510541 LRRC56Q8IYG6 542 aaPredicted RBP16.66■□□□□ 0.26
CLDND1-221ENST00000510541 CPNE9Q8IYJ1 553 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 MYO1HQ8N1T3 1032 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 OR2A1Q8NGT9 310 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 SKA2Q8WVK7 121 aaPredicted RBP16.66■□□□□ 0.26
CLDND1-221ENST00000510541 TSPAN17Q96FV3 270 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 CCDC138Q96M89 665 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 OR6C1Q96RD1 312 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 PCBD2Q9H0N5 130 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 XKR8Q9H6D3 395 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 ACSS3Q9H6R3 686 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 FANCEQ9HB96 536 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 SPHK1Q9NYA1 384 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 TXNDC16Q9P2K2 825 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 ZFHX4Q86UP3 3567 aa16.66■□□□□ 0.26
CLDND1-221ENST00000510541 FAM95CA0A1B0GW59 222 aa16.65■□□□□ 0.26
CLDND1-221ENST00000510541 A0A1W2PPV9 198 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms