RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 SCN1BQ07699 218 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 ZNF415Q09FC8 603 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 ZRSR1Q15695 479 aaKnown RBP3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 ODF4Q2M2E3 257 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 ITPRIPL2Q3MIP1 535 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 UGT3A2Q3SY77 523 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 TECRLQ5HYJ1 363 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 DCAF10Q5QP82 559 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 CYP4A22Q5TCH4 519 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 FAM91A1Q658Y4 838 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 SLC27A1Q6PCB7 646 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 ENPP7Q6UWV6 458 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 SPATA19Q7Z5L4 167 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 TIGD4Q8IY51 512 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 CDK20Q8IZL9 346 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 RYBPQ8N488 228 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 ANKRD13CQ8N6S4 541 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 C9orf43Q8TAL5 461 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 KCNE4Q8WWG9 221 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 ALG14Q96F25 216 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 CTAGE1Q96RT6 745 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 RAD9AQ99638 391 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 RHNO1Q9BSD3 238 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 GTPBP2Q9BX10 602 aaKnown RBP3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 BICC1Q9H694 974 aaKnown RBP3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 TXNDC16Q9P2K2 825 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 CACNG4Q9UBN1 327 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 RASAL2Q9UJF2 1139 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 ACAD8Q9UKU7 415 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 TMED3Q9Y3Q3 217 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 TRIM17Q9Y577 477 aa3.75□□□□□ -1.81
HMGB1P28-201ENST00000507778 A0A1W2PN81 502 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 FAM172BPA6NC97 362 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 H0Y626 953 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 BMPR1BO00238 502 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 P2RY10O00398 339 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 LUC7L3O95232 432 aaKnown RBP3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 IGHV4-38-2P0DP08 117 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 MYL6BP14649 208 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 LIFP15018 202 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 EFNA1P20827 205 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 CA4P22748 312 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 TLX1P31314 330 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 CHRNA7P36544 502 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 HSD17B3P37058 310 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 DCTP40126 519 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 PRKCIP41743 596 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 ALDH3A2P51648 485 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 TUBB2AQ13885 445 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 NPTX1Q15818 432 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 UGCGQ16739 394 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 FAM76BQ5HYJ3 339 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 SPDYCQ5MJ68 293 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 MPP7Q5T2T1 576 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 C19orf48Q6RUI8 117 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 SLC26A9Q7LBE3 791 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 FAM219AQ8IW50 185 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 SIX6OS1Q8N1H7 587 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 BMPERQ8N8U9 685 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 LMNTD1Q8N9Z9 388 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 OR11H4Q8NGC9 324 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 VANGL1Q8TAA9 524 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 OLIG1Q8TAK6 271 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 NSMAFQ92636 917 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 PROX1Q92786 737 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 ERO1AQ96HE7 468 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 LMLNQ96KR4 655 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 JAKMIP1Q96N16 626 aaKnown RBP3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 TUBB2BQ9BVA1 445 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 PANK2Q9BZ23 570 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 PRRG4Q9BZD6 226 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 LAT2Q9GZY6 243 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 DNAJC4Q9NNZ3 241 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 ZNF580Q9UK33 172 aa3.74□□□□□ -1.81
HMGB1P28-201ENST00000507778 LOC101059948A0A1B0GTJ6 334 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 A0A1W2PPK0 400 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 DNM1LO00429 736 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 LMX1BO60663 402 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 SLU7O95391 586 aaKnown RBP3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 TSHBP01222 138 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 PRSS1P07477 247 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 ZFYP08048 801 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 VIMP08670 466 aaKnown RBP3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 TCF4P15884 667 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 ADRA2CP18825 462 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 RBBP5Q15291 538 aaKnown RBP3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 TAF13Q15543 124 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 CCDC184Q52MB2 194 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 WDR38Q5JTN6 314 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 C1QTNF12Q5T7M4 302 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 SHEQ5VZ18 495 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 RUSC1-AS1Q66K80 236 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 MFSD6Q6ZSS7 791 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 MSANTD1Q6ZTZ1 278 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 LGI2Q8N0V4 545 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 EID3Q8N140 333 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 NDUFAF2Q8N183 169 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 MAPKAPK5-AS1Q8N8E1 139 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 KLHDC9Q8NEP7 349 aa3.73□□□□□ -1.81
HMGB1P28-201ENST00000507778 OR4K1Q8NGD4 311 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms