RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 HBQ1P09105 142 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 SLC35E2BP0CK96 405 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 OAS2P29728 719 aaKnown RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 ALDH4A1P30038 563 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 CSTF2P33240 577 aaKnown RBP eCLIP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 HSD17B3P37058 310 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 PREPP48147 710 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 CCL7P80098 99 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 HSD11B2P80365 405 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 MAP7Q14244 749 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 SEPT7Q16181 437 aaKnown RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 ZC3H12BQ5HYM0 836 aaKnown RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 MANEAQ5SRI9 462 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 HP1BP3Q5SSJ5 553 aaPredicted RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 PERM1Q5SV97 790 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 RBM20Q5T481 1227 aaKnown RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 HES3Q5TGS1 186 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 SULT1C3Q6IMI6 304 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 UBE2R2Q712K3 238 aaPredicted RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 SLCO6A1Q86UG4 719 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 KIRREL3Q8IZU9 778 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 TBC1D19Q8N5T2 526 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 LMNTD1Q8N9Z9 388 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 SIDT2Q8NBJ9 832 aaKnown RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 PDPRQ8NCN5 879 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 MYRIPQ8NFW9 859 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 GIMAP7Q8NHV1 300 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 LKAAEAR1Q8TD35 194 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 DCAKDQ8WVC6 231 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 SKA2Q8WVK7 121 aaPredicted RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 UBLCP1Q8WVY7 318 aaPredicted RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 LINGO1Q96FE5 620 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 TCTN2Q96GX1 697 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 SLC41A2Q96JW4 573 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 MRPL57Q9BQC6 102 aaKnown RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 MENTQ9BUN1 341 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 SARGQ9BW04 601 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 EPB41L4BQ9H329 900 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 SEMA6CQ9H3T2 930 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 EHD1Q9H4M9 534 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 VIPAS39Q9H9C1 493 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 FANCEQ9HB96 536 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 SSU72Q9NP77 194 aaKnown RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 HRASLS2Q9NWW9 162 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 IL1RAPL1Q9NZN1 696 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 CTNNAL1Q9UBT7 734 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 ANGPTL2Q9UKU9 493 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 PSMD13Q9UNM6 376 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 WASF3Q9UPY6 502 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 STK38LQ9Y2H1 464 aa8.2□□□□□ -1.1
PDGFC-205ENST00000506880 MDC1Q14676 2089 aaKnown RBP8.2□□□□□ -1.1
PDGFC-205ENST00000506880 NCOR2Q9Y618 2525 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 A0A0J9YY10 115 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 DCDC2BA2VCK2 349 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 ARHGEF33A8MVX0 844 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 NVLO15381 856 aaKnown RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 PRICKLE3O43900 615 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 SRPX2O60687 465 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 UGDHO60701 494 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 MT-ND3P03897 115 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 ALDOAP04075 364 aaKnown RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 S100BP04271 92 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 C2P06681 752 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 CHRM5P08912 532 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 FAM153BP0C7A2 387 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 MYZAPP0CAP1 466 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 CCDC166P0CW27 439 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 NELFEP18615 380 aaKnown RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 CXCR2P25025 360 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 CMPK1P30085 196 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 SERPINB1P30740 379 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 CCT5P48643 541 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 PNLIPRP1P54315 467 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 NFKB2Q00653 900 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 PRDX1Q06830 199 aaKnown RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 IFFO1Q0D2I5 559 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 PPP1R3AQ16821 1122 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 KIF26BQ2KJY2 2108 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 CCDC153Q494R4 210 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 FAM153CQ494X1 144 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 CAPN13Q6MZZ7 669 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 SPESP1Q6UW49 350 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 LCTLQ6UWM7 567 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 SBSNQ6UWP8 590 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 CEACAM20Q6UY09 585 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 RAPH1Q70E73 1250 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 FRA10AC1Q70Z53 315 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 VRK3Q8IV63 474 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 CPNE9Q8IYJ1 553 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 ADGRF3Q8IZF5 1079 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 D2HGDHQ8N465 521 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 LILRA3Q8N6C8 439 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 C7orf57Q8NEG2 295 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 TTLQ8NG68 377 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 OR5AR1Q8NGP9 310 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 OR56A3Q8NH54 315 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 RDH11Q8TC12 318 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 UBTD2Q8WUN7 234 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 EEF1AKMT1Q8WVE0 214 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms