RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ZNF184Q99676 751 aaPredicted RBP11.86□□□□□ -0.51
LIN54-206ENST00000506560 BATF3Q9NR55 127 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 DNAJC11Q9NVH1 559 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 ABCD2Q9UBJ2 740 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 PSMD13Q9UNM6 376 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 PCDHA9Q9Y5H5 950 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 DENND4AQ7Z401 1863 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 BBIP1A8MTZ0 92 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 K7EQS6 105 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 EEDO75530 441 aaKnown RBP11.86□□□□□ -0.51
LIN54-206ENST00000506560 PCDH8O95206 1070 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 NCK1P16333 377 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 VARSP26640 1264 aaKnown RBP11.86□□□□□ -0.51
LIN54-206ENST00000506560 LTBRP36941 435 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 GRIA2P42262 883 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 ADAM15Q13444 863 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 DDX39BQ13838 428 aaKnown RBP11.86□□□□□ -0.51
LIN54-206ENST00000506560 IMPG1Q17R60 797 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 SPANXN4Q5MJ08 99 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 LRRC70Q7Z2Q7 622 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 TRIM46Q7Z4K8 759 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 C11orf96Q7Z7L8 435 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 THOC6Q86W42 341 aaKnown RBP11.86□□□□□ -0.51
LIN54-206ENST00000506560 HEATR4Q86WZ0 1026 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 RALGPS2Q86X27 583 aaPredicted RBP11.86□□□□□ -0.51
LIN54-206ENST00000506560 PQLC1Q8N2U9 271 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 KIAA1958Q8N8K9 716 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 CXorf40AQ8TE69 158 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 GFM2Q969S9 779 aaKnown RBP11.86□□□□□ -0.51
LIN54-206ENST00000506560 TMEM125Q96AQ2 219 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 ROPN1LQ96C74 230 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 PPP1R16AQ96I34 528 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 MTERF1Q99551 399 aaKnown RBP11.86□□□□□ -0.51
LIN54-206ENST00000506560 TRMT61BQ9BVS5 477 aaKnown RBP11.86□□□□□ -0.51
LIN54-206ENST00000506560 SEMA6AQ9H2E6 1030 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 LRTM1Q9HBL6 345 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 CD93Q9NPY3 652 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 CLDND1Q9NY35 253 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 ZIM2Q9NZV7 527 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 PLAGL1Q9UM63 463 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 CFAP20Q9Y6A4 193 aaKnown RBP11.86□□□□□ -0.51
LIN54-206ENST00000506560 VCANP13611 3396 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 PCM1Q15154 2024 aa11.86□□□□□ -0.51
LIN54-206ENST00000506560 FAM234BA2RU67 622 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 ZNF839A8K0R7 811 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 H3BM21 787 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 LATO43561 262 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 POP7O75817 140 aaKnown RBP11.85□□□□□ -0.51
LIN54-206ENST00000506560 C1QCP02747 245 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 GNPDA1P46926 289 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 MTPNP58546 118 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 PHC1P78364 1004 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 PRKG2Q13237 762 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 SP140Q13342 867 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 CST6Q15828 149 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 WSCD2Q2TBF2 565 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 ITPRIPL2Q3MIP1 535 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 FAM174BQ3ZCQ3 159 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 GTDC1Q4AE62 458 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 TMEM52BQ4KMG9 183 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 ANO7Q6IWH7 933 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 PHC3Q8NDX5 983 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 GLMNQ92990 594 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 IL17FQ96PD4 163 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 ECSITQ9BQ95 431 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 EBPLQ9BY08 206 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 OSBPL6Q9BZF3 934 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 RAD18Q9NS91 495 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 SLC6A13Q9NSD5 602 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 RIMS3Q9UJD0 308 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 OR1A2Q9Y585 309 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 PRSS51A0A1B0GVH4 220 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 KPNA5O15131 536 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 RGS14O43566 566 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 SMNDC1O75940 238 aaKnown RBP eCLIP11.85□□□□□ -0.51
LIN54-206ENST00000506560 LRATO95237 230 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 MAP4P27816 1152 aaKnown RBP11.85□□□□□ -0.51
LIN54-206ENST00000506560 GRIA3P42263 894 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 RAB30Q15771 203 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 SAMD4BQ5PRF9 694 aaKnown RBP11.85□□□□□ -0.51
LIN54-206ENST00000506560 NANOGP8Q6NSW7 305 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 DLEU7Q6UYE1 221 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 TRMT11Q7Z4G4 463 aaKnown RBP11.85□□□□□ -0.51
LIN54-206ENST00000506560 SPPL2CQ8IUH8 684 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 MINDY1Q8N5J2 469 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 FBXL8Q96CD0 374 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 PPP3R2Q96LZ3 170 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 TSSK3Q96PN8 268 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 MYOCQ99972 504 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 ELOVL6Q9H5J4 265 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 CAAP1Q9H8G2 361 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 NANOGQ9H9S0 305 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 MRGBPQ9NV56 204 aa11.85□□□□□ -0.51
LIN54-206ENST00000506560 C1QTNF3-AMACRE9PGA6 284 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 IFRD1O00458 451 aaPredicted RBP11.84□□□□□ -0.51
LIN54-206ENST00000506560 C1orf105O95561 183 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 ETHE1O95571 254 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 PAK4O96013 591 aaPredicted RBP11.84□□□□□ -0.51
LIN54-206ENST00000506560 FUCA1P04066 466 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 APODP05090 189 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms