RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 RPS6KA5O75582 802 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 RFPL2O75678 378 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 EPN2O95208 641 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 H1F0P07305 194 aaKnown RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 SBK2P0C263 348 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 AHCYP23526 432 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PTGER4P35408 488 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 IL15P40933 162 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PSMC4P43686 418 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 ASMTP46597 345 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 HTR6P50406 440 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 GMFBP60983 142 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 COG7P83436 770 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 SRSF4Q08170 494 aaKnown RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PNRC1Q12796 327 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 ILF2Q12905 390 aaKnown RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 TRA2AQ13595 282 aaKnown RBP eCLIP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 VEZF1Q14119 521 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 TRIP6Q15654 476 aaKnown RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 NPTX1Q15818 432 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PTGISQ16647 500 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 UGP2Q16851 508 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 CTU2Q2VPK5 515 aaKnown RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 MCMDC2Q4G0Z9 681 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 LACTB2Q53H82 288 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 SYT14P1Q58G82 188 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 EFHC1Q5JVL4 640 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 FNBP1LQ5T0N5 605 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 C10orf25Q5T742 122 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 GRTP1Q5TC63 336 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 C12orf60Q5U649 245 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PRAMEF8Q5VWM4 474 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 GALNT17Q6IS24 598 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 SLC18B1Q6NT16 456 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 NEK5Q6P3R8 708 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 ZNF704Q6ZNC4 412 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 RBM43Q6ZSC3 357 aaKnown RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PLEKHM3Q6ZWE6 761 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 DGLUCYQ7Z3D6 616 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 ANKRD46Q86W74 232 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 FAM114A1Q8IWE2 563 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 KLHDC8AQ8IYD2 350 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 BATF2Q8N1L9 274 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 RDM1Q8NG50 284 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 OR52I2Q8NH67 350 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 CCDC110Q8TBZ0 833 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 LRRC8CQ8TDW0 803 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 SEMA4DQ92854 862 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 SYAP1Q96A49 352 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 FAM84BQ96KN1 310 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PANX3Q96QZ0 392 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 RAD9AQ99638 391 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 C1QTNF7Q9BXJ2 289 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 TEX13AQ9BXU3 409 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PRRG4Q9BZD6 226 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PRSS22Q9GZN4 317 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 NAPBQ9H115 298 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 P2RY12Q9H244 342 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 LRMDAQ9H2I8 198 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PLAC1Q9HBJ0 212 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 Q9N2K0 584 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 GSN-AS1Q9NRJ2 163 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 SERINC1Q9NRX5 453 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 TCP11L1Q9NUJ3 509 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 FAM118AQ9NWS6 357 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 TRIM10Q9UDY6 481 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 TRMT6Q9UJA5 497 aaKnown RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 TSPAN16Q9UKR8 245 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 AMDHD2Q9Y303 409 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PCDHAC2Q9Y5I4 1007 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 HS3ST3B1Q9Y662 390 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 AP1M2Q9Y6Q5 423 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 COL3A1P02461 1466 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 TRAV24A0A0B4J272 114 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 RPS10-NUDT3A0A1W2PQS6 291 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 RGSL1A5PLK6 1076 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 OR5K3A6NET4 321 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 ADAM10O14672 748 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 SPRY3O43610 288 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 PRAF2O60831 178 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 HSF2BPO75031 334 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 SOCS5O75159 536 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 NME6O75414 186 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 SERPINI2O75830 405 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 SYF2O95926 243 aaKnown RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 IGHDP01880 384 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 LCATP04180 440 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 ANKRD34CP0C6C1 535 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 CYP19A1P11511 503 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 IRF2P14316 349 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 ETS1P14921 441 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 CYP2A7P20853 494 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 PIK3R1P27986 724 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 C21orf33P30042 268 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 RPL21P46778 160 aaKnown RBP3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 RABIFP47224 123 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 KCNJ4P48050 445 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 AMTP48728 403 aa3.69□□□□□ -1.82
TRAPPC13-208ENST00000505553 TKTL1P51854 596 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms