RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 RNF148Q8N7C7 305 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 AMER3Q8N944 861 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 MCHR2Q969V1 340 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 PTDSS2Q9BVG9 487 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 CLEC5AQ9NY25 188 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 DLGAP2Q9P1A6 1054 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 UXTQ9UBK9 157 aaPredicted RBP5.07□□□□□ -1.6
NIPBL-204ENST00000504430 MRPS33Q9Y291 106 aaKnown RBP5.07□□□□□ -1.6
NIPBL-204ENST00000504430 A0A087WV48 116 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 GOLGA8IPA6NC78 632 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 ZAR1LA6NP61 321 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 STAG3L2P0CL84 134 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 ARHGDIAP52565 204 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 GSCP56915 257 aaPredicted RBP5.07□□□□□ -1.6
NIPBL-204ENST00000504430 SLC37A1P57057 533 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 SELENOVP59797 346 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 TIAL1Q01085 375 aaKnown RBP eCLIP5.07□□□□□ -1.6
NIPBL-204ENST00000504430 ACSM2AQ08AH3 577 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 CAMK4Q16566 473 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 HKDC1Q2TB90 917 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 C6orf183Q5T699 404 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 ACSM2BQ68CK6 577 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 NADSYN1Q6IA69 706 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 SERINC5Q86VE9 423 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 IZUMO1Q8IYV9 350 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 PDZD8Q8NEN9 1154 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 OR10S1Q8NGN2 331 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 FAM20AQ96MK3 541 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 GTPBP2Q9BX10 602 aaKnown RBP5.07□□□□□ -1.6
NIPBL-204ENST00000504430 PIGMQ9H3S5 423 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 SENP1Q9P0U3 644 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 KIAA1456Q9P272 454 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 TRIM10Q9UDY6 481 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 CRLS1Q9UJA2 301 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 SBNO1A3KN83 1393 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 CFAP65Q6ZU64 1925 aaKnown RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 GOLGA8TH3BQL2 631 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 AP4M1O00189 453 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 ZNF189O75820 626 aaPredicted RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 KNG1P01042 644 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 F7P08709 466 aaPredicted RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 NUDT17P0C025 328 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 NCK1P16333 377 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 HNRNPH3P31942 346 aaKnown RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 TCF15Q12870 199 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 SGCAQ16586 387 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 DECR1Q16698 335 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 LRRC38Q5VT99 294 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 ZDHHC20Q5W0Z9 365 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 ATG9BQ674R7 924 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 SNRNP48Q6IEG0 339 aaKnown RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 SLC25A25Q6KCM7 469 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 NANOGNBQ7Z5D8 188 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 SYT12Q8IV01 421 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 C1orf210Q8IVY1 113 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 FITM2Q8N6M3 262 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 OR4A16Q8NH70 328 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 OSCP1Q8WVF1 389 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 ULK4Q96C45 1275 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 C14orf79Q96F83 325 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 TECTBQ96PL2 329 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 FYTTD1Q96QD9 318 aaKnown RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 NPY6RQ99463 290 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 NPAS2Q99743 824 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 SPATA16Q9BXB7 569 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 C12orf65Q9H3J6 166 aaKnown RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 FN3KRPQ9HA64 309 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 MEAF6Q9HAF1 191 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 KCNK9Q9NPC2 374 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 ZCCHC3Q9NUD5 404 aaKnown RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 ANKFY1Q9P2R3 1169 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 RGS17Q9UGC6 210 aaPredicted RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 GPR132Q9UNW8 380 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 AOX1Q06278 1338 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 HEG1Q9ULI3 1381 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 GFRA3O60609 400 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 ATG13O75143 517 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 LCA5LO95447 670 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 CXCL10P02778 98 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 AMHP03971 560 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 CSF2P04141 144 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 CA3P07451 260 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 PPIAP62937 165 aaKnown RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 MTHFSDQ2M296 383 aaKnown RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 HNRNPA1L2Q32P51 320 aaKnown RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 EDRF1Q3B7T1 1238 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 ZSWIM9Q86XI8 627 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 MAP7D3Q8IWC1 876 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 TIGD4Q8IY51 512 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 ABI1Q8IZP0 508 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 GPT2Q8TD30 523 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 SLC2A14Q8TDB8 520 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 RFKQ969G6 155 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 TOP1MTQ969P6 601 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 HINT2Q9BX68 163 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 SIK2Q9H0K1 926 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 MRM3Q9HC36 420 aaKnown RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 TMEM161AQ9NX61 479 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 KLHL8Q9P2G9 620 aaPredicted RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 DHX15O43143 795 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms