RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 B3GNT8Q7Z7M8 397 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 ISCA2Q86U28 154 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 C4orf33Q8N1A6 199 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 MAGEC3Q8TD91 643 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 KIAA1191Q96A73 305 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 ALKBH8Q96BT7 664 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 TGM7Q96PF1 710 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 GFM1Q96RP9 751 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 ATG10Q9H0Y0 220 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 C12orf65Q9H3J6 166 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 SEMA6CQ9H3T2 930 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 ARL15Q9NXU5 204 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 LGALS13Q9UHV8 139 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 PCDHGA1Q9Y5H4 931 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 COL27A1Q8IZC6 1860 aaPredicted RBP12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 CNOT1A5YKK6 2376 aaKnown RBP12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 FAM149AA5PLN7 773 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 OR5K3A6NET4 321 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 ISM1B1AKI9 464 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 UBXN8O00124 270 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 CAPN5O15484 640 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 DUX1O43812 170 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 DKK1O94907 266 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 SLC16A8O95907 504 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 CHRM5P08912 532 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 CREB1P16220 341 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 PSMB5P28074 263 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 IMPA1P29218 277 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 RAB28P51157 221 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 KPNA2P52292 529 aaKnown RBP12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 PNLIPRP1P54315 467 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 GPLD1P80108 840 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 E2F1Q01094 437 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 SP140Q13342 867 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 SPIDRQ14159 915 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 FAM83EQ2M2I3 478 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 ZXDCQ2QGD7 858 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 N4BP2L1Q5TBK1 243 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 HES3Q5TGS1 186 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 ARMC6Q6NXE6 501 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 LRIG3Q6UXM1 1119 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 SH2D5Q6ZV89 423 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 FRA10AC1Q70Z53 315 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 CLEC14AQ86T13 490 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 TRIM73Q86UV7 250 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 TRABD2AQ86V40 505 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 OOSP2Q86WS3 158 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 GPSM1Q86YR5 675 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 SRRM1Q8IYB3 904 aaKnown RBP12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 RIBC1Q8N443 379 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 CHCHD4Q8N4Q1 142 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 FBXO15Q8NCQ5 510 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 OR2L8Q8NGY9 312 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 ZNF480Q8WV37 535 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 TRIM54Q9BYV2 358 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 KLHL25Q9H0H3 589 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 ACTR10Q9NZ32 417 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 TMEM216Q9P0N5 145 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 STOX2Q9P2F5 926 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 RNF112Q9ULX5 631 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 OARD1Q9Y530 152 aa12.84□□□□□ -0.35
PDLIM7-212ENST00000504380 A0A1W2PPV9 198 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 PIPSLA2A3N6 862 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 D6RAR5 112 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 RGS16O15492 202 aaPredicted RBP12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 SPAG7O75391 227 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 CPNE6O95741 557 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 MT-CO3P00414 261 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 HIST1H2AGP0C0S8 130 aaPredicted RBP12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 PVRP15151 417 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 KRT4P19013 534 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 HIST1H2ADP20671 130 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 SLC26A3P40879 764 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 CAPZBP47756 277 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 LSSP48449 732 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 YBX1P67809 324 aaKnown RBP12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 ACAP2Q15057 778 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 CYP2A13Q16696 494 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 TECRLQ5HYJ1 363 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 CDCP2Q5VXM1 449 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 ANKS6Q68DC2 871 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 AGTRAPQ6RW13 159 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 CDHR3Q6ZTQ4 885 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 ADAMTSL2Q86TH1 951 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 SYTL1Q8IYJ3 562 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 RCBTB1Q8NDN9 531 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 ANKRD7Q92527 254 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 ESAMQ96AP7 390 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 CABS1Q96KC9 395 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 HIST1H2AHQ96KK5 128 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 CCDC74BQ96LY2 380 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 CCDC138Q96M89 665 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 OR2A14Q96R47 310 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 ATOH8Q96SQ7 321 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 MAP3K3Q99759 626 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 HIST1H2AJQ99878 128 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 EGFL8Q99944 293 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 H2AFJQ9BTM1 129 aa12.83□□□□□ -0.36
PDLIM7-212ENST00000504380 ACAT2Q9BWD1 397 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms