RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 KLHL1Q9NR64 748 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ADPRHL2Q9NX46 363 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ZSCAN32Q9NX65 697 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 EMC3Q9P0I2 261 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SERGEFQ9UGK8 458 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ADAMTS5Q9UNA0 930 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 LHX6Q9UPM6 363 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC9A8Q9Y2E8 581 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 NDUFAF1Q9Y375 327 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FARP1Q9Y4F1 1045 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 DGKBQ9Y6T7 804 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FRMPD3Q5JV73 1810 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 A0A1W2PPW3 197 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MARCH11A6NNE9 402 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 DLL1O00548 723 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PDPK1O15530 556 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 DYRK3O43781 588 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SEC22BO75396 215 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CREG1O75629 220 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 EIF3GO75821 320 aaKnown RBP eCLIP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ITGALP20701 1170 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ALDH4A1P30038 563 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CD68P34810 354 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PIK3CGP48736 1102 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 DIO1P49895 249 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 AKR1D1P51857 326 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MRPS11P82912 194 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ARF5P84085 180 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ADIGQ0VDE8 80 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CDH17Q12864 832 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FAPQ12884 760 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PPP1R8Q12972 351 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 BAMBIQ13145 260 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TNK1Q13470 666 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RBMS2Q15434 407 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TRIP4Q15650 581 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ETFDHQ16134 617 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MTX3Q5HYI7 312 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RALGPS1Q5JS13 557 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 HECTD3Q5T447 861 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SPRYD7Q5W111 196 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MRNIPQ6NTE8 343 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 WDR73Q6P4I2 378 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 DEGS2Q6QHC5 323 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PLEKHG7Q6ZR37 379 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 KCNMB4Q86W47 210 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC9A9Q8IVB4 645 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 DEFB106AQ8N104 65 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 AMER2Q8N7J2 671 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM47BQ8NA70 645 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TSPAN14Q8NG11 270 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PIK3R3Q92569 461 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CIDECQ96AQ7 238 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 APOPT1Q96IL0 206 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PARK7Q99497 189 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 NPAS2Q99743 824 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 C1orf50Q9BV19 199 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 NPLQ9BXD5 320 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MRPL37Q9BZE1 423 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MS4A7Q9GZW8 240 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RACGAP1Q9H0H5 632 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CATSPERBQ9H7T0 1116 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CHST11Q9NPF2 352 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 GLTPQ9NZD2 209 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SUCOQ9UBS9 1254 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PCDHB5Q9Y5E4 795 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RLFQ13129 1914 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CASP8AP2Q9UKL3 1982 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PDZK1P1A8MUH7 402 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 AHRRA9YTQ3 701 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 B9A039 149 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PSMD9O00233 223 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FRS3O43559 492 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 VPS26AO75436 327 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TIPRLO75663 272 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PTBP3O95758 552 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ASS1P00966 412 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ADRB1P08588 477 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RPS17P08708 135 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC10A3P09131 477 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF26P17031 533 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CTPS1P17812 591 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MATN1P21941 496 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PSMB4P28070 264 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RFC2P35250 354 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SREBF1P36956 1147 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TAF6P49848 677 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 GNG10P50151 68 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PRKAG1P54619 331 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MAXP61244 160 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SREBF2Q12772 1141 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 BOP1Q14137 746 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 VEPH1Q14D04 833 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RGS21Q2M5E4 152 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 POM121L1PQ3SYA9 428 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 IER5Q5VY09 327 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 XAF1Q6GPH4 301 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 C11orf88Q6PI97 169 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 LRRC55Q6ZSA7 311 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 LINC00523Q86TU6 105 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms