RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ATOH8Q96SQ7 321 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SEC62Q99442 399 aaKnown RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 EYA3Q99504 573 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 TSC22D3Q99576 134 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SLF1Q9BQI6 1058 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CCDC28BQ9BUN5 200 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SLC26A6Q9BXS9 759 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 PANK2Q9BZ23 570 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 GCOM2Q9BZD3 368 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 PUS3Q9BZE2 481 aaKnown RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 KLHL4Q9C0H6 718 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CCSER1Q9C0I3 900 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 C6orf62Q9GZU0 229 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 DRC3Q9H069 523 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CSTL1Q9H114 145 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SIL1Q9H173 461 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 GLT8D2Q9H1C3 349 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ADNPQ9H2P0 1102 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 GOLPH3LQ9H4A5 285 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 RAD21L1Q9H4I0 556 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 STN1Q9H668 368 aaKnown RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 BICC1Q9H694 974 aaKnown RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 PANK3Q9H999 370 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CHODLQ9H9P2 273 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 VCX3AQ9NNX9 186 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SAYSD1Q9NPB0 183 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 PIH1D3Q9NQM4 214 aaKnown RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CNGB3Q9NQW8 809 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 C8orf4Q9NR00 106 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 GLRX2Q9NS18 164 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 FARSBQ9NSD9 589 aaKnown RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ATAD3AQ9NVI7 634 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 NMRK1Q9NWW6 199 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ADPRHL2Q9NX46 363 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SAGE1Q9NXZ1 904 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 IL37Q9NZH6 218 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 FETUBQ9UGM5 382 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SRP68Q9UHB9 627 aaKnown RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 IL19Q9UHD0 177 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SLC7A8Q9UHI5 535 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 PTBP2Q9UKA9 531 aaKnown RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 RCOR1Q9UKL0 485 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 PSME2Q9UL46 239 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 KIAA1257Q9ULG3 409 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 FAF1Q9UNN5 650 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 EXOC7Q9UPT5 735 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 R3HDM2Q9Y2K5 976 aaKnown RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 KCNK7Q9Y2U2 307 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 NFE2L3Q9Y4A8 694 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 A3GALT2U3KPV4 340 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SMG6Q86US8 1419 aaKnown RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 THOC2Q8NI27 1593 aaKnown RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ABCC11Q96J66 1382 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CUX2O14529 1486 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 SCAF11Q99590 1463 aaKnown RBP1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 PDS5AQ29RF7 1337 aaKnown RBP1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 ADGRF5Q8IZF2 1346 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 PASKQ96RG2 1323 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 A0A0U1RQF3 1178 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 A0A1B0GWJ7 208 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 HEATR9A2RTY3 570 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 RGSL1A5PLK6 1076 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 OR6C74A6NCV1 312 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 TSPY2A6NKD2 308 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 HSPB2A8KAH6 182 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 SYCE1LA8MT33 242 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 F5H423 210 aaPredicted RBP1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 SLCO1B7G3V0H7 640 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 GOLGA8MH3BSY2 632 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 O00370 1275 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 E2F3O00716 465 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 AP3D1O14617 1153 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 BET1O15155 118 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 MAGEB3O15480 346 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 ZW10O43264 779 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 RIPK2O43353 540 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 BUB1O43683 1085 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 CIDEAO60543 219 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 SEC22BO75396 215 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 CLN5O75503 358 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 TSPAN9O75954 239 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 GOSR1O95249 250 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 ADCY5O95622 1261 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 DNTTP04053 509 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 ATP5BP06576 529 aaKnown RBP1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 ASGR1P07306 291 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 INHBAP08476 426 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 TSPY3P0CV98 308 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 TSPY8P0CW00 308 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 POU2F1P14859 743 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 ANPEPP15144 967 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 PAX1P15863 534 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 PORP16435 677 aaPredicted RBP1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 ALOX12P18054 663 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 EIF2S2P20042 333 aaKnown RBP1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 ITGAXP20702 1163 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 CDH3P22223 829 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 SP100P23497 879 aaPredicted RBP1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 HMOX2P30519 316 aa1.95□□□□□ -2.1
HMGB3P17-201ENST00000504195 EVI2BP34910 448 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms