RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 GMPR2Q9P2T1 348 aaKnown RBP20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 PRSS51A0A1B0GVH4 220 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 UGDHO60701 494 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 NPPAP01160 153 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 ZNF8P17098 575 aaPredicted RBP20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 GALK1P51570 392 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 PCDH1Q08174 1060 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 GTF2H3Q13889 308 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 ADAMTSL4Q6UY14 1074 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 THOC6Q86W42 341 aaKnown RBP20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 ZNF513Q8N8E2 541 aaPredicted RBP20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 OR56A3Q8NH54 315 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 TMEM125Q96AQ2 219 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 HIC2Q96JB3 615 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 RIPOR3Q96MK2 946 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 PKP4Q99569 1192 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 K7EQS6 105 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 SEC22BO75396 215 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 C1orf105O95561 183 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 JUPP14923 745 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 VARSP26640 1264 aaKnown RBP20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 IMPA1P29218 277 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 TNFRSF4P43489 277 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 KIR2DL1P43626 348 aaPredicted RBP20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 CHIT1Q13231 466 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 LIPJQ5W064 366 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 SPATA24Q86W54 205 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 EZH1Q92800 747 aaPredicted RBP20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 ELOVL6Q9H5J4 265 aa20.76■□□□□ 0.91
UBE2D3-216ENST00000503742 SLC16A8O95907 504 aa20.75■□□□□ 0.91
UBE2D3-216ENST00000503742 NAE1Q13564 534 aa20.75■□□□□ 0.91
UBE2D3-216ENST00000503742 PTGR1Q14914 329 aa20.75■□□□□ 0.91
UBE2D3-216ENST00000503742 AAK1Q2M2I8 961 aa20.75■□□□□ 0.91
UBE2D3-216ENST00000503742 MAP7D1Q3KQU3 841 aa20.75■□□□□ 0.91
UBE2D3-216ENST00000503742 HABP4Q5JVS0 413 aaKnown RBP20.75■□□□□ 0.91
UBE2D3-216ENST00000503742 C11orf96Q7Z7L8 435 aa20.75■□□□□ 0.91
UBE2D3-216ENST00000503742 DUS3LQ96G46 650 aaKnown RBP20.75■□□□□ 0.91
UBE2D3-216ENST00000503742 SLAMF8Q9P0V8 285 aa20.75■□□□□ 0.91
UBE2D3-216ENST00000503742 TCRBV3S1A0A5B6 114 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 IGLON5A6NGN9 336 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 DNAJA2O60884 412 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 POP7O75817 140 aaKnown RBP20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 ADH1BP00325 375 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 HALP42357 657 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 CCR3P51677 355 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 NEK2P51955 445 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 CLNS1AP54105 237 aaKnown RBP20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 RHDQ02161 417 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 USP39Q53GS9 565 aaKnown RBP20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 LPCAT4Q643R3 524 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 FRG2Q64ET8 278 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 PNCKQ6P2M8 343 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 SUSD1Q6UWL2 747 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 IZUMO2Q6UXV1 221 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 KIAA2013Q8IYS2 634 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 LIX1Q8N485 282 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 OR2L2Q8NH16 312 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 FRG2BQ96QU4 278 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 OR4K3Q96R72 315 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 ECSITQ9BQ95 431 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 RIMS3Q9UJD0 308 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 TRPM6Q9BX84 2022 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 TICRRQ7Z2Z1 1910 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 SZT2Q5T011 3432 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 RNASEH1O60930 286 aaKnown RBP20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 CD22P20273 847 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 C5AR1P21730 350 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 PEX2P28328 305 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 PLOD1Q02809 727 aaPredicted RBP20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 AGERQ15109 404 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 CACHD1Q5VU97 1274 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 SLC2A7Q6PXP3 512 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 DLEU7Q6UYE1 221 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 GLB1L3Q8NCI6 653 aaPredicted RBP20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 HM13Q8TCT9 377 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 NUDT8Q8WV74 236 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 DPEP2Q9H4A9 486 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 LRCH1Q9Y2L9 728 aa20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 PCYT1BQ9Y5K3 369 aaPredicted RBP20.74■□□□□ 0.91
UBE2D3-216ENST00000503742 XIRP2A4UGR9 3374 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 BCKDHAP12694 445 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 MTHFRP42898 656 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 IRF8Q02556 426 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 ZNF33BQ06732 778 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 TRIP10Q15642 601 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 OGFRL1Q5TC84 451 aaPredicted RBP20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 PRR23BQ6ZRT6 265 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 MTSS1LQ765P7 747 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 DHFR2Q86XF0 187 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 CACUL1Q86Y37 369 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 TMEM126BQ8IUX1 230 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 DNAJB14Q8TBM8 379 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 ZUFSPQ96AP4 578 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 CMTM7Q96FZ5 175 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 VCX3BQ9H321 246 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 SERGEFQ9UGK8 458 aa20.73■□□□□ 0.91
UBE2D3-216ENST00000503742 MGAT4DA6NG13 374 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 PEX1O43933 1283 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 DGKQP52824 942 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms