RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CDH7Q9ULB5 785 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 LTBP2Q14767 1821 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 hCG_2014768A0A024R1R8 64 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 IGLV3-16A0A075B6K0 115 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 A0A0J9YVX5 310 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 A0A1W2PPW3 197 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 PRAMEF4O60810 478 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 CREG1O75629 220 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SERPINA1P01009 418 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 UGT2B4P06133 528 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SDC1P18827 310 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 EEF1B2P24534 225 aaKnown RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 PTPN6P29350 595 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SLC6A12P48065 614 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 GALK1P51570 392 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 PTPN5P54829 565 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 CLDN8P56748 225 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 NUP107P57740 925 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SLC7A9P82251 487 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SLC14A1Q13336 389 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 GBX1Q14549 363 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 CBX2Q14781 532 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 PTCHD3Q3KNS1 767 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 GGTA1PQ4G0N0 100 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 LRIF1Q5T3J3 769 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 PRAMEF9Q5VWM5 478 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 ATG9BQ674R7 924 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SPESP1Q6UW49 350 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 FAM43BQ6ZT52 329 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 LRRC70Q7Z2Q7 622 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 ZNF551Q7Z340 670 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 METTL3Q86U44 580 aaKnown RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 RNF175Q8N4F7 328 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 PJA1Q8NG27 643 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 OR10Q1Q8NGQ4 319 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SDCCAG3Q96C92 435 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 ZNF689Q96CS4 500 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 APIPQ96GX9 242 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 EGLN2Q96KS0 407 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 MCCC1Q96RQ3 725 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 BEGAINQ9BUH8 593 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SLC12A9Q9BXP2 914 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 KCNH6Q9H252 994 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 ELOVL6Q9H5J4 265 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 RC3H2Q9HBD1 1191 aaKnown RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 PREBQ9HCU5 417 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 FAM118AQ9NWS6 357 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 MAN2B2Q9Y2E5 1009 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 PPIL1Q9Y3C6 166 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 PCDHGA8Q9Y5G5 932 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 PDE4DIPQ5VU43 2346 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 A0A096LPI6 279 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 A0A1W2PRU2 124 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 LEFTY2O00292 366 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 FOXD2O60548 495 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 MTX2O75431 263 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 ERN1O75460 977 aaKnown RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 LRATO95237 230 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 GNRH1P01148 92 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 C1QCP02747 245 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 RETP07949 1114 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 MYCLP1P12525 358 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 S100A3P33764 101 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 TTKP33981 857 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 ENTPD1P49961 510 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 DEFB103AP81534 67 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 BOP1Q14137 746 aaKnown RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 FGD3Q5JSP0 725 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 XAF1Q6GPH4 301 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 SERPINA13PQ6UXR4 307 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 DPY19L3Q6ZPD9 716 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 THAP5Q7Z6K1 395 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 DDX53Q86TM3 631 aaKnown RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 RBM23Q86U06 439 aaKnown RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 C8orf59Q8N0T1 100 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 OR13F1Q8NGS4 319 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 FAM81AQ8TBF8 368 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 PNPT1Q8TCS8 783 aaKnown RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 FAM120BQ96EK7 910 aaKnown RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 RDH12Q96NR8 316 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 P2RY13Q9BPV8 354 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 FANCEQ9HB96 536 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 GPRC5BQ9NZH0 403 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 KLHL42Q9P2K6 505 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 B4GALT6Q9UBX8 382 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 HS3ST2Q9Y278 367 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 PRRC2BQ5JSZ5 2229 aaKnown RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 PLXNA2O75051 1894 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 GNGT2O14610 69 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 TGM5O43548 720 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 NUAK1O60285 661 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 ARHGEF15O94989 841 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 OR56A5P0C7T3 313 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 CD247P20963 164 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 MATN1P21941 496 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 PRKACGP22612 351 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 ITPKAP23677 461 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 CRHBPP24387 322 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 CA8P35219 290 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 MAPK10P53779 464 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms