RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 SMARCAL1Q9NZC9 954 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 COPG2Q9UBF2 871 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 CTSFQ9UBX1 484 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 POLG2Q9UHN1 485 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 MYO7BQ6PIF6 2116 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 A0A1B0GUH1 482 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 BHMG1C9JSJ3 638 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-212ENST00000498540 GOLGA6L19H0YKK7 550 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 H7C0S8 307 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 AP2A2O94973 939 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 ONECUT2O95948 504 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 ALBP02768 609 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 MCM3P25205 808 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 KCNK10P57789 538 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 OTUD4Q01804 1114 aaKnown RBP14.1□□□□□ -0.15
TRAF4-212ENST00000498540 PRPSAP1Q14558 356 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 KIR2DS3Q14952 304 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 TUBB8Q3ZCM7 444 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 LINC00696Q6ZRV3 163 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 MCATQ8IVS2 390 aaKnown RBP14.1□□□□□ -0.15
TRAF4-212ENST00000498540 DTWD1Q8N5C7 304 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 METTL27Q8N6F8 245 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-212ENST00000498540 LMNTD1Q8N9Z9 388 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 OR11G2Q8NGC1 345 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 CCDC110Q8TBZ0 833 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 ACTL9Q8TC94 416 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 KRT35Q92764 455 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 FAM118BQ9BPY3 351 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 SLC26A1Q9H2B4 701 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 ARNT2Q9HBZ2 717 aa14.1□□□□□ -0.15
TRAF4-212ENST00000498540 MRM3Q9HC36 420 aaKnown RBP14.1□□□□□ -0.15
TRAF4-212ENST00000498540 NLE1Q9NVX2 485 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-212ENST00000498540 SLC5A10A0PJK1 596 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 MACROD2A1Z1Q3 448 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 DSCR3O14972 297 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 KCNN4O15554 427 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 JRKO75564 520 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 KLHL18O94889 574 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 AP2A1O95782 977 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 PKLRP30613 574 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 TDGF1P3P51864 188 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 ARSFP54793 590 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 CACNG1Q06432 222 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 MFAP5Q13361 173 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 RBBP7Q16576 425 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 ZNF324BQ6AW86 544 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-212ENST00000498540 ISLR2Q6UXK2 745 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 BCORP1Q8N888 145 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 LINC01555Q8NAE3 123 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 RELTQ969Z4 430 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 CDKN2AIPNLQ96HQ2 116 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 SPATA13Q96N96 652 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 TRIM56Q9BRZ2 755 aaKnown RBP14.09□□□□□ -0.15
TRAF4-212ENST00000498540 CUTCQ9NTM9 273 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 CIDEBQ9UHD4 219 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 INTUQ9ULD6 942 aa14.09□□□□□ -0.15
TRAF4-212ENST00000498540 OR51F1A6NGY5 319 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 FTH1P02794 183 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 PIM1P11309 404 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-212ENST00000498540 TPH1P17752 444 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 ANP32AP39687 249 aaKnown RBP14.08□□□□□ -0.16
TRAF4-212ENST00000498540 GRIA3P42263 894 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 NSG1P42857 185 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 OR1D4P47884 311 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 CSE1LP55060 971 aaKnown RBP14.08□□□□□ -0.16
TRAF4-212ENST00000498540 HADHBP55084 474 aaKnown RBP14.08□□□□□ -0.16
TRAF4-212ENST00000498540 TRIM14Q14142 442 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 SYTL3Q4VX76 610 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 CCDC181Q5TID7 509 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 FCRL6Q6DN72 434 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 RPUSD3Q6P087 351 aaKnown RBP14.08□□□□□ -0.16
TRAF4-212ENST00000498540 TAX1BP1Q86VP1 789 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 CDKL3Q8IVW4 592 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-212ENST00000498540 C2orf73Q8N5S3 287 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-212ENST00000498540 OR1N1Q8NGS0 311 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 ITLN2Q8WWU7 325 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-212ENST00000498540 MAGEB10Q96LZ2 347 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-212ENST00000498540 TAAR6Q96RI8 345 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 MENTQ9BUN1 341 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 SEMA3GQ9NS98 782 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 FEZ2Q9UHY8 353 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-212ENST00000498540 NXT1Q9UKK6 140 aaKnown RBP14.08□□□□□ -0.16
TRAF4-212ENST00000498540 DCHS2Q6V1P9 2916 aa14.08□□□□□ -0.16
TRAF4-212ENST00000498540 HEATR9A2RTY3 570 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 VSTM2BA6NLU5 285 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 PCDH17O14917 1159 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 MFAP3LO75121 409 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 RBP3P10745 1247 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 RAB28P51157 221 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 EIF3EP60228 445 aaKnown RBP14.07□□□□□ -0.16
TRAF4-212ENST00000498540 ART3Q13508 389 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 POU6F1Q14863 301 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 KCTD11Q693B1 232 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 PACS1Q6VY07 963 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 TMTC1Q8IUR5 882 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 KLHDC8BQ8IXV7 354 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 DENND1AQ8TEH3 1009 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 IL17FQ96PD4 163 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 FERMT1Q9BQL6 677 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 ZNF160Q9HCG1 818 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms