RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 RHOXF2BP0C7M4 288 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 GAP43P17677 238 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 UBA1P22314 1058 aaKnown RBP4.67□□□□□ -1.66
SSR3-209ENST00000498205 DGKAP23743 735 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 RPA1P27694 616 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 CASP1P29466 404 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 HSPA9P38646 679 aaKnown RBP4.67□□□□□ -1.66
SSR3-209ENST00000498205 TNNC1P63316 161 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 PDE1BQ01064 536 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 TMEM115Q12893 351 aaPredicted RBP4.67□□□□□ -1.66
SSR3-209ENST00000498205 ALCAMQ13740 583 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 CCDC96Q2M329 555 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 COL28A1Q2UY09 1125 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 EIF2S3LQ2VIR3 472 aaKnown RBP4.67□□□□□ -1.66
SSR3-209ENST00000498205 LETM2Q2VYF4 491 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 DCST1Q5T197 706 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 CFAP58Q5T655 872 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 SFMBT2Q5VUG0 894 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 KDM7AQ6ZMT4 941 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 DPPA4Q7L190 304 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 TEX11Q8IYF3 940 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 RASGEF1CQ8N431 466 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 CNBD1Q8NA66 436 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 POC1AQ8NBT0 407 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 GMCL1P1Q8NEA9 526 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 ERMNQ8TAM6 284 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 LRRC15Q8TF66 581 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 SORCS1Q8WY21 1168 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 LRRC45Q96CN5 670 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 ARHGEF26Q96DR7 871 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 MMABQ96EY8 250 aaPredicted RBP4.67□□□□□ -1.66
SSR3-209ENST00000498205 RRNAD1Q96FB5 475 aaKnown RBP4.67□□□□□ -1.66
SSR3-209ENST00000498205 QRFPRQ96P65 431 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 NAP1L3Q99457 506 aaPredicted RBP4.67□□□□□ -1.66
SSR3-209ENST00000498205 RHOXF2Q9BQY4 288 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 POLR3CQ9BUI4 534 aaPredicted RBP4.67□□□□□ -1.66
SSR3-209ENST00000498205 GANQ9H2C0 597 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 MAGIXQ9H6Y5 334 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 ZCCHC17Q9NP64 241 aaKnown RBP4.67□□□□□ -1.66
SSR3-209ENST00000498205 SUCLA2Q9P2R7 463 aaPredicted RBP4.67□□□□□ -1.66
SSR3-209ENST00000498205 ACSL5Q9ULC5 683 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 RABGAP1Q9Y3P9 1069 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 MYH7BA7E2Y1 1941 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 PFASO15067 1338 aa4.67□□□□□ -1.66
SSR3-209ENST00000498205 PP2D1A8MPX8 630 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 B4E171 279 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 SCAMP1O15126 338 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 HSF2BPO75031 334 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 JRKO75564 520 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 S1PR1P21453 382 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 GNL1P36915 607 aaPredicted RBP4.66□□□□□ -1.66
SSR3-209ENST00000498205 TSPAN7P41732 249 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 BTDP43251 543 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 ZNF131P52739 623 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 MAD2L1Q13257 205 aaPredicted RBP4.66□□□□□ -1.66
SSR3-209ENST00000498205 CXorf66Q5JRM2 361 aaPredicted RBP4.66□□□□□ -1.66
SSR3-209ENST00000498205 PAPPA-AS1Q5QFB9 102 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 AGBL2Q5U5Z8 902 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 C8orf74Q6P047 294 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 DUS1LQ6P1R4 473 aaKnown RBP4.66□□□□□ -1.66
SSR3-209ENST00000498205 LRRC31Q6UY01 552 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 STXBP4Q6ZWJ1 553 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 MAATS1Q7Z4T9 603 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 CUZD1Q86UP6 607 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 HAPLN4Q86UW8 402 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 NR2C2APQ86WQ0 139 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 KMT5CQ86Y97 462 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 C12orf56Q8IXR9 622 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 RNF168Q8IYW5 571 aaPredicted RBP4.66□□□□□ -1.66
SSR3-209ENST00000498205 METTL27Q8N6F8 245 aaPredicted RBP4.66□□□□□ -1.66
SSR3-209ENST00000498205 SYT2Q8N9I0 419 aaPredicted RBP4.66□□□□□ -1.66
SSR3-209ENST00000498205 TMEM116Q8NCL8 245 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 SPATA22Q8NHS9 363 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 SCFD2Q8WU76 684 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 POMGNT1Q8WZA1 660 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 ARHGEF2Q92974 986 aaKnown RBP4.66□□□□□ -1.66
SSR3-209ENST00000498205 TAAR8Q969N4 342 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 CENPTQ96BT3 561 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 LMLNQ96KR4 655 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 RUNDC3BQ96NL0 473 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 RUFY1Q96T51 708 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 ACOX2Q99424 681 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 SEPT5Q99719 369 aaPredicted RBP4.66□□□□□ -1.66
SSR3-209ENST00000498205 TMEM109Q9BVC6 243 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 C1QTNF5Q9BXJ0 243 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 IDI2Q9BXS1 227 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 CAPS2Q9BXY5 557 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 CARD9Q9H257 536 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 KCNN2Q9H2S1 579 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 YY1AP1Q9H869 796 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 PCDHB16Q9NRJ7 776 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 ACSS1Q9NUB1 689 aaPredicted RBP4.66□□□□□ -1.66
SSR3-209ENST00000498205 TMEM30AQ9NV96 361 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 DDX25Q9UHL0 483 aaKnown RBP4.66□□□□□ -1.66
SSR3-209ENST00000498205 PNMA2Q9UL42 364 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 GRIN2DO15399 1336 aa4.66□□□□□ -1.66
SSR3-209ENST00000498205 ARFGEF1Q9Y6D6 1849 aa4.65□□□□□ -1.66
SSR3-209ENST00000498205 C5orf60A6NFR6 353 aa4.65□□□□□ -1.67
SSR3-209ENST00000498205 ERICH4A6NGS2 130 aa4.65□□□□□ -1.67
SSR3-209ENST00000498205 MIF4GDA9UHW6 222 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms