RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 DHRS7BQ6IAN0 325 aaPredicted RBP3.09□□□□□ -1.91
SMC4-227ENST00000497984 TMCO3Q6UWJ1 677 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 HAUS6Q7Z4H7 955 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 EVI5LQ96CN4 794 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 OR6C1Q96RD1 312 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 RPP25Q9BUL9 199 aaKnown RBP3.09□□□□□ -1.91
SMC4-227ENST00000497984 VN1R1Q9GZP7 353 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 ARRDC1-AS1Q9H2J1 176 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 MMP27Q9H306 513 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 PANK3Q9H999 370 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 WSB2Q9NYS7 404 aaPredicted RBP3.09□□□□□ -1.91
SMC4-227ENST00000497984 LARSQ9P2J5 1176 aaKnown RBP3.09□□□□□ -1.91
SMC4-227ENST00000497984 MUTYHQ9UIF7 546 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 HACL1Q9UJ83 578 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 OSGIN1Q9UJX0 560 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 PLAGL1Q9UM63 463 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 PPP1R3CQ9UQK1 317 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 C15orf61A6NNL5 157 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 MPTX1A8MV57 137 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 DOK2O60496 412 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 PRAMEF11O60813 436 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 CREG1O75629 220 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 TSPAN9O75954 239 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 HOXD13P35453 343 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 GEMIN4P57678 1058 aaKnown RBP3.08□□□□□ -1.92
SMC4-227ENST00000497984 CDK3Q00526 305 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 CREB5Q02930 508 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 C15orf59Q2T9L4 293 aaPredicted RBP3.08□□□□□ -1.92
SMC4-227ENST00000497984 MDH1BQ5I0G3 518 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 MIPOL1Q8TD10 442 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 NSUN4Q96CB9 384 aaKnown RBP3.08□□□□□ -1.92
SMC4-227ENST00000497984 FNBP1Q96RU3 617 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 BTBD10Q9BSF8 475 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 C16orf70Q9BSU1 422 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 KIFC3Q9BVG8 833 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 TBC1D22BQ9NU19 505 aa3.08□□□□□ -1.92
SMC4-227ENST00000497984 WBP11Q9Y2W2 641 aaKnown RBP3.08□□□□□ -1.92
SMC4-227ENST00000497984 OR2A25A4D2G3 310 aa3.07□□□□□ -1.92
SMC4-227ENST00000497984 A6NCN8 305 aa3.07□□□□□ -1.92
SMC4-227ENST00000497984 MED24O75448 989 aa3.07□□□□□ -1.92
SMC4-227ENST00000497984 PAX9P55771 341 aa3.07□□□□□ -1.92
SMC4-227ENST00000497984 TMF1P82094 1093 aa3.07□□□□□ -1.92
SMC4-227ENST00000497984 MC1RQ01726 317 aa3.07□□□□□ -1.92
SMC4-227ENST00000497984 EPS8Q12929 822 aa3.07□□□□□ -1.92
SMC4-227ENST00000497984 RNF212Q495C1 297 aa3.07□□□□□ -1.92
SMC4-227ENST00000497984 SZRD1Q7Z422 152 aa3.07□□□□□ -1.92
SMC4-227ENST00000497984 LDB1Q86U70 411 aaPredicted RBP3.07□□□□□ -1.92
SMC4-227ENST00000497984 KIRREL3Q8IZU9 778 aa3.07□□□□□ -1.92
SMC4-227ENST00000497984 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.07□□□□□ -1.92
SMC4-227ENST00000497984 RNF128Q8TEB7 428 aa3.07□□□□□ -1.92
SMC4-227ENST00000497984 LMF2Q9BU23 707 aaKnown RBP3.07□□□□□ -1.92
SMC4-227ENST00000497984 TEX12Q9BXU0 123 aa3.07□□□□□ -1.92
SMC4-227ENST00000497984 MRPL1Q9BYD6 325 aaKnown RBP3.07□□□□□ -1.92
SMC4-227ENST00000497984 ZNF701Q9NV72 531 aaPredicted RBP3.07□□□□□ -1.92
SMC4-227ENST00000497984 ARHGEF38Q9NXL2 777 aa3.07□□□□□ -1.92
SMC4-227ENST00000497984 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.07□□□□□ -1.923e-11■■■□□ 18.8
SMC4-227ENST00000497984 FSD2A1L4K1 749 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 GAPDHSO14556 408 aaPredicted RBP3.06□□□□□ -1.92
SMC4-227ENST00000497984 CTDSP2O14595 271 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 TSPAN1O60635 241 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 AVILO75366 819 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 DFFBO76075 338 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 ALOX12P18054 663 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 EIF5P55010 431 aaKnown RBP3.06□□□□□ -1.92
SMC4-227ENST00000497984 CX3CL1P78423 397 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 HYIQ5T013 277 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 SEL1L3Q68CR1 1132 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 AFAP1Q8N556 730 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 NIPA2Q8N8Q9 360 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 OR10G8Q8NGN5 311 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 GHITMQ9H3K2 345 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 SPHK2Q9NRA0 654 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 BLOC1S4Q9NUP1 217 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 SPHK1Q9NYA1 384 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 RHCGQ9UBD6 479 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 TUBE1Q9UJT0 475 aa3.06□□□□□ -1.92
SMC4-227ENST00000497984 ZNF215Q9UL58 517 aaPredicted RBP3.06□□□□□ -1.92
SMC4-227ENST00000497984 A0A1W2PQ09 198 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 ANKRD18BA2A2Z9 1011 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 HEPACAM2A8MVW5 462 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 MAGEC1O60732 1142 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 CSH1P0DML2 217 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 CSH2P0DML3 217 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 TRIM21P19474 475 aaKnown RBP3.05□□□□□ -1.92
SMC4-227ENST00000497984 PDX1P52945 283 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 HERV-K104P61576 105 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 CHAF1BQ13112 559 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 NTRK2Q16620 822 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 MOGAT2Q3SYC2 334 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 PDLIM3Q53GG5 364 aaPredicted RBP3.05□□□□□ -1.92
SMC4-227ENST00000497984 BTN2A1Q7KYR7 527 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 CEP57Q86XR8 500 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 KRTAP11-1Q8IUC1 163 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 TRIML1Q8N9V2 468 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 POC5Q8NA72 575 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 SMAP2Q8WU79 429 aaPredicted RBP3.05□□□□□ -1.92
SMC4-227ENST00000497984 PTPMT1Q8WUK0 201 aaPredicted RBP3.05□□□□□ -1.92
SMC4-227ENST00000497984 ARHGAP45Q92619 1136 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 GAL3ST4Q96RP7 486 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 PUS3Q9BZE2 481 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms