RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 SRP72O76094 671 aaKnown RBP15.78■□□□□ 0.12
VIM-208ENST00000497849 CRYABP02511 175 aaKnown RBP15.78■□□□□ 0.12
VIM-208ENST00000497849 CHRM5P08912 532 aaPredicted RBP15.78■□□□□ 0.12
VIM-208ENST00000497849 ART1P52961 327 aa15.78■□□□□ 0.12
VIM-208ENST00000497849 CNGA4Q8IV77 575 aa15.78■□□□□ 0.12
VIM-208ENST00000497849 DNAJB8Q8NHS0 232 aa15.78■□□□□ 0.12
VIM-208ENST00000497849 BRIX1Q8TDN6 353 aaKnown RBP15.78■□□□□ 0.12
VIM-208ENST00000497849 DLG3Q92796 817 aa15.78■□□□□ 0.12
VIM-208ENST00000497849 FKBPLQ9UIM3 349 aa15.78■□□□□ 0.12
VIM-208ENST00000497849 ARL5AQ9Y689 179 aa15.78■□□□□ 0.12
VIM-208ENST00000497849 PPP1R12AO14974 1030 aaPredicted RBP15.77■□□□□ 0.12
VIM-208ENST00000497849 PROSCO94903 275 aa15.77■□□□□ 0.12
VIM-208ENST00000497849 RASAL1O95294 804 aa15.77■□□□□ 0.12
VIM-208ENST00000497849 PIM1P11309 404 aaPredicted RBP15.77■□□□□ 0.12
VIM-208ENST00000497849 ESRRAP11474 423 aaPredicted RBP15.77■□□□□ 0.12
VIM-208ENST00000497849 NFKB1P19838 968 aa15.77■□□□□ 0.12
VIM-208ENST00000497849 PEBP1P30086 187 aaKnown RBP15.77■□□□□ 0.12
VIM-208ENST00000497849 SHMT2P34897 504 aa15.77■□□□□ 0.12
VIM-208ENST00000497849 ARSFP54793 590 aa15.77■□□□□ 0.12
VIM-208ENST00000497849 XIAPP98170 497 aa15.77■□□□□ 0.12
VIM-208ENST00000497849 RBPJQ06330 500 aa15.77■□□□□ 0.12
VIM-208ENST00000497849 KBTBD2Q8IY47 623 aa15.77■□□□□ 0.12
VIM-208ENST00000497849 DTWD1Q8N5C7 304 aa15.77■□□□□ 0.12
VIM-208ENST00000497849 OR5AR1Q8NGP9 310 aa15.77■□□□□ 0.12
VIM-208ENST00000497849 C8orf44Q96CB5 159 aa15.77■□□□□ 0.12
VIM-208ENST00000497849 DCUN1D1Q96GG9 259 aa15.77■□□□□ 0.12
VIM-208ENST00000497849 OXNAD1Q96HP4 312 aaPredicted RBP15.77■□□□□ 0.12
VIM-208ENST00000497849 VPS50Q96JG6 964 aa15.77■□□□□ 0.12
VIM-208ENST00000497849 TREX2Q9BQ50 279 aaPredicted RBP15.77■□□□□ 0.12
VIM-208ENST00000497849 ZNHIT6Q9NWK9 470 aaKnown RBP15.77■□□□□ 0.12
VIM-208ENST00000497849 NXT1Q9UKK6 140 aaKnown RBP15.77■□□□□ 0.12
VIM-208ENST00000497849 PRRC2AP48634 2157 aaKnown RBP15.77■□□□□ 0.11
VIM-208ENST00000497849 A0A087X0T9 212 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 C3orf70A6NLC5 250 aaPredicted RBP15.76■□□□□ 0.11
VIM-208ENST00000497849 DSCR3O14972 297 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 USP1O94782 785 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 FAM228BP0C875 321 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 PRR35P0CG20 571 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 CD99P14209 185 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 ATP1B2P14415 290 aaPredicted RBP15.76■□□□□ 0.11
VIM-208ENST00000497849 OR1D4P47884 311 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 CASP6P55212 293 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 CSNK1G2P78368 415 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 WASHC5Q12768 1159 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 FAAH2Q6GMR7 532 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 NCCRP1Q6ZVX7 275 aaPredicted RBP15.76■□□□□ 0.11
VIM-208ENST00000497849 SIRT6Q8N6T7 355 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 OR4K2Q8NGD2 314 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 CCDC110Q8TBZ0 833 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.76■□□□□ 0.11
VIM-208ENST00000497849 CUTCQ9NTM9 273 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 IMPACTQ9P2X3 320 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 KLHL20Q9Y2M5 609 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 GTF3C1Q12789 2109 aa15.76■□□□□ 0.11
VIM-208ENST00000497849 LRRD1A4D1F6 860 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 GOLGA6L6A8MZA4 724 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 ZNF487B1APH4 448 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 APOL1O14791 398 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 WDPCPO95876 746 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 PTMAP06454 111 aaKnown RBP15.75■□□□□ 0.11
VIM-208ENST00000497849 RALBP11234 206 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 ACPPP15309 386 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 MAGP20916 626 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 MCM3P25205 808 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 PMP22Q01453 160 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 KLC1Q07866 573 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 RPA4Q13156 261 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 ATG9BQ674R7 924 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 MCATQ8IVS2 390 aaKnown RBP15.75■□□□□ 0.11
VIM-208ENST00000497849 METTL27Q8N6F8 245 aaPredicted RBP15.75■□□□□ 0.11
VIM-208ENST00000497849 IPMKQ8NFU5 416 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.75■□□□□ 0.11
VIM-208ENST00000497849 CRB3Q9BUF7 120 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 FAM96AQ9H5X1 160 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 NHEJ1Q9H9Q4 299 aaPredicted RBP15.75■□□□□ 0.11
VIM-208ENST00000497849 OR6C2Q9NZP2 312 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 CRLS1Q9UJA2 301 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 ZNF835Q9Y2P0 537 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 MEMO1Q9Y316 297 aa15.75■□□□□ 0.11
VIM-208ENST00000497849 MRPS2Q9Y399 296 aaKnown RBP15.75■□□□□ 0.11
VIM-208ENST00000497849 BZW2Q9Y6E2 419 aaKnown RBP15.75■□□□□ 0.11
VIM-208ENST00000497849 ISM1B1AKI9 464 aa15.74■□□□□ 0.11
VIM-208ENST00000497849 MAP2K7O14733 419 aa15.74■□□□□ 0.11
VIM-208ENST00000497849 CELA2AP08217 269 aa15.74■□□□□ 0.11
VIM-208ENST00000497849 COX6A1P12074 109 aa15.74■□□□□ 0.11
VIM-208ENST00000497849 ASTE1Q2TB18 679 aaPredicted RBP15.74■□□□□ 0.11
VIM-208ENST00000497849 MEX3BQ6ZN04 569 aaKnown RBP15.74■□□□□ 0.11
VIM-208ENST00000497849 AMER2Q8N7J2 671 aa15.74■□□□□ 0.11
VIM-208ENST00000497849 DENND1AQ8TEH3 1009 aa15.74■□□□□ 0.11
VIM-208ENST00000497849 PANX2Q96RD6 677 aa15.74■□□□□ 0.11
VIM-208ENST00000497849 FCRL5Q96RD9 977 aa15.74■□□□□ 0.11
VIM-208ENST00000497849 COPS8Q99627 209 aa15.74■□□□□ 0.11
VIM-208ENST00000497849 TMEM121Q9BTD3 319 aa15.74■□□□□ 0.11
VIM-208ENST00000497849 SPTLC3Q9NUV7 552 aa15.74■□□□□ 0.11
VIM-208ENST00000497849 PLAGL1Q9UM63 463 aa15.74■□□□□ 0.11
VIM-208ENST00000497849 MAU2Q9Y6X3 613 aa15.74■□□□□ 0.11
VIM-208ENST00000497849 MED26O95402 600 aa15.73■□□□□ 0.11
VIM-208ENST00000497849 SERPINA7P05543 415 aa15.73■□□□□ 0.11
VIM-208ENST00000497849 FDXRP22570 491 aa15.73■□□□□ 0.11
VIM-208ENST00000497849 ACADLP28330 430 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms