RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 MAGP20916 626 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 CD9P21926 228 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 TTPAP49638 278 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 RAPSNQ13702 412 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 SLC9A5Q14940 896 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 TMED2Q15363 201 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 INPP5JQ15735 1006 aaPredicted RBP16.5■□□□□ 0.23
SMC4-226ENST00000497311 NKAIN1Q4KMZ8 207 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 PCID2Q5JVF3 399 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 UNC5DQ6UXZ4 953 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 LDB1Q86U70 411 aaPredicted RBP16.5■□□□□ 0.23
SMC4-226ENST00000497311 DCUN1D3Q8IWE4 304 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 FAM20CQ8IXL6 584 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 RBMXL3Q8N7X1 1067 aaKnown RBP16.5■□□□□ 0.23
SMC4-226ENST00000497311 LINC01555Q8NAE3 123 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 CLEC1AQ8NC01 280 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 OR2Y1Q8NGV0 311 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 LKAAEAR1Q8TD35 194 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 PSMG3-AS1Q96PY0 264 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 EURLQ9NYK6 297 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.5■□□□□ 0.23
SMC4-226ENST00000497311 C5AR2Q9P296 337 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 ESPL1Q14674 2120 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 ANKRD12Q6UB98 2062 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 BLACEA4D250 179 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 CD3EAPO15446 510 aaKnown RBP16.49■□□□□ 0.23
SMC4-226ENST00000497311 SLCO2B1O94956 709 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 S1PR4O95977 384 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 ZSCAN5DPP0CG00 497 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 ALAS2P22557 587 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 AOAHP28039 575 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 RPL22P35268 128 aaKnown RBP16.49■□□□□ 0.23
SMC4-226ENST00000497311 RPS6KA1Q15418 735 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 CCNG2Q16589 344 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 FHL5Q5TD97 284 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 VWA5B1Q5TIE3 1220 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 SLC6A19Q695T7 634 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 PTRHD1Q6GMV3 140 aaKnown RBP16.49■□□□□ 0.23
SMC4-226ENST00000497311 MRPL14Q6P1L8 145 aaKnown RBP16.49■□□□□ 0.23
SMC4-226ENST00000497311 TTC23LQ6PF05 361 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 KRT222Q8N1A0 295 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 C2orf73Q8N5S3 287 aaPredicted RBP16.49■□□□□ 0.23
SMC4-226ENST00000497311 GSDMBQ8TAX9 411 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 DENND1AQ8TEH3 1009 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 DLG3Q92796 817 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 PNPLA2Q96AD5 504 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 PTERQ96BW5 349 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 IL17FQ96PD4 163 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 PANX3Q96QZ0 392 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 MENTQ9BUN1 341 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 LRRC4CQ9HCJ2 640 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 INTS7Q9NVH2 962 aaKnown RBP16.49■□□□□ 0.23
SMC4-226ENST00000497311 LUZP4Q9P127 313 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 CIDEBQ9UHD4 219 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 SLC39A10Q9ULF5 831 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 KLHL20Q9Y2M5 609 aa16.49■□□□□ 0.23
SMC4-226ENST00000497311 SHANK1Q9Y566 2161 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 PCSK5Q92824 1860 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 KLHL41O60662 606 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 VARSP26640 1264 aaKnown RBP16.48■□□□□ 0.23
SMC4-226ENST00000497311 ARSFP54793 590 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 SESN2P58004 480 aaPredicted RBP16.48■□□□□ 0.23
SMC4-226ENST00000497311 GRB7Q14451 532 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 SF1Q15637 639 aaKnown RBP16.48■□□□□ 0.23
SMC4-226ENST00000497311 DCAF10Q5QP82 559 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 MEI1Q5TIA1 1274 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 TAX1BP1Q86VP1 789 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 MCATQ8IVS2 390 aaKnown RBP16.48■□□□□ 0.23
SMC4-226ENST00000497311 LMNTD1Q8N9Z9 388 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 Q8NA96 180 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 OR2L8Q8NGY9 312 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 IL22Q9GZX6 179 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 EIF2B3Q9NR50 452 aaKnown RBP16.48■□□□□ 0.23
SMC4-226ENST00000497311 P4HTMQ9NXG6 502 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 MARCH4Q9P2E8 410 aaPredicted RBP16.48■□□□□ 0.23
SMC4-226ENST00000497311 MAP10Q9P2G4 905 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 GNPTGQ9UJJ9 305 aa16.48■□□□□ 0.23
SMC4-226ENST00000497311 PRRC2CQ9Y520 2896 aaKnown RBP16.48■□□□□ 0.23
SMC4-226ENST00000497311 SPTAN1Q13813 2472 aaKnown RBP16.47■□□□□ 0.23
SMC4-226ENST00000497311 AP3B1O00203 1094 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 RASGRF2O14827 1237 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 KPNA5O15131 536 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 CNOT3O75175 753 aaKnown RBP16.47■□□□□ 0.23
SMC4-226ENST00000497311 NDUFS3O75489 264 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 AGFG2O95081 481 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 ALPPP05187 535 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 NPY2RP49146 381 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 CRADDP78560 199 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 BASP1P80723 227 aaKnown RBP16.47■□□□□ 0.23
SMC4-226ENST00000497311 MYBPC3Q14896 1274 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 CYP2A13Q16696 494 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 PRR30Q53SZ7 412 aaPredicted RBP16.47■□□□□ 0.23
SMC4-226ENST00000497311 ZC3H12BQ5HYM0 836 aaKnown RBP16.47■□□□□ 0.23
SMC4-226ENST00000497311 FIGLAQ6QHK4 219 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 C4orf22Q6V702 233 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 TTLL10Q6ZVT0 673 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 MPP5Q8N3R9 675 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 GALNT16Q8N428 558 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 RAB11FIP5Q9BXF6 653 aa16.47■□□□□ 0.23
SMC4-226ENST00000497311 P2RY12Q9H244 342 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms