RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 ACVR1CQ8NER5 493 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 OR4F6Q8NGB9 312 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 LCN9Q8WX39 176 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 DLG3Q92796 817 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 ATG10Q9H0Y0 220 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 WDR55Q9H6Y2 383 aaPredicted RBP8.16□□□□□ -1.1
USP54-215ENST00000497106 PELI2Q9HAT8 420 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 PCDH10Q9P2E7 1040 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 FAM170BA6NMN3 283 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 FFAR3O14843 346 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 GPR42O15529 346 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 CPA2P48052 419 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 ADPRHP54922 357 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 ELOCQ15369 112 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 CDKN3Q16667 212 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 SLC9B1Q4ZJI4 515 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 SPIN4Q56A73 249 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 FRG2Q64ET8 278 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 OXR1Q8N573 874 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 RASGEF1AQ8N9B8 481 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 SLC5A11Q8WWX8 675 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 FRG2BQ96QU4 278 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 NTMT1Q9BV86 223 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 C1orf21Q9H246 121 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 SPASTQ9UBP0 616 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 PTBP2Q9UKA9 531 aaKnown RBP8.16□□□□□ -1.1
USP54-215ENST00000497106 SARDHQ9UL12 918 aa8.16□□□□□ -1.1
USP54-215ENST00000497106 ZNF638Q14966 1978 aaKnown RBP8.16□□□□□ -1.1
USP54-215ENST00000497106 KCNH1O95259 989 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 ASGR2P07307 311 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 ALPPL2P10696 532 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 JUPP14923 745 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 IL10P22301 178 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 EMX2Q04743 252 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 UBAP2LQ14157 1087 aaKnown RBP8.15□□□□□ -1.1
USP54-215ENST00000497106 AGERQ15109 404 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 SYT13Q7L8C5 426 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 NET1Q7Z628 596 aaPredicted RBP8.15□□□□□ -1.1
USP54-215ENST00000497106 SORT1Q99523 831 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 CCDC3Q9BQI4 270 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 MIR1-1HGQ9H1L0 117 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 ANKRD33BA6NCL7 494 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 ISM1B1AKI9 464 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 PLK4O00444 970 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 WFS1O76024 890 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 BMP10O95393 424 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 ZNF8P17098 575 aaPredicted RBP8.15□□□□□ -1.1
USP54-215ENST00000497106 PREPP48147 710 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 ACADVLP49748 655 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 BNIP2Q12982 314 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 DEFB107AQ8IZN7 70 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 NELL1Q92832 810 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 CMTM7Q96FZ5 175 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 CCDC167Q9P0B6 97 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 GALPQ9UBC7 116 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 SNX7Q9UNH6 387 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 FAM234BA2RU67 622 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 GRXCR2A6NFK2 248 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 PRMT3O60678 531 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 PSIP1O75475 530 aaKnown RBP8.15□□□□□ -1.1
USP54-215ENST00000497106 ANXA6P08133 673 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 GSTM5P46439 218 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 FOXM1Q08050 763 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 WSCD2Q2TBF2 565 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 LCTLQ6UWM7 567 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 NAPRTQ6XQN6 538 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 CEP68Q76N32 757 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 TRIM74Q86UV6 250 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 ADHFE1Q8IWW8 467 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 KIF2BQ8N4N8 673 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 CPSF7Q8N684 471 aaKnown RBP8.15□□□□□ -1.1
USP54-215ENST00000497106 ZFP28Q8NHY6 868 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 CDX2Q99626 313 aaPredicted RBP8.15□□□□□ -1.1
USP54-215ENST00000497106 ASPSCR1Q9BZE9 553 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 SRMSQ9H3Y6 488 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 MIEF1Q9NQG6 463 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 ARL8BQ9NVJ2 186 aa8.15□□□□□ -1.1
USP54-215ENST00000497106 FADS2P1A8MWK0 482 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 NRP2O60462 931 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 BAG2O95816 211 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 NPPAP01160 153 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 IL6P05231 212 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 AMD1P17707 334 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 CTSCP53634 463 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 CREB5Q02930 508 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 ZFP1Q6P2D0 407 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 PGAM4Q8N0Y7 254 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 ITCHQ96J02 903 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 GBP5Q96PP8 586 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 SPAG4Q9NPE6 437 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 POLR3HQ9Y535 204 aaPredicted RBP8.15□□□□□ -1.11
USP54-215ENST00000497106 TIMM22Q9Y584 194 aa8.15□□□□□ -1.11
USP54-215ENST00000497106 SLC5A10A0PJK1 596 aa8.14□□□□□ -1.11
USP54-215ENST00000497106 SDHDO14521 159 aa8.14□□□□□ -1.11
USP54-215ENST00000497106 ME2P23368 584 aa8.14□□□□□ -1.11
USP54-215ENST00000497106 KIR2DL1P43626 348 aaPredicted RBP8.14□□□□□ -1.11
USP54-215ENST00000497106 CXCL12P48061 93 aa8.14□□□□□ -1.11
USP54-215ENST00000497106 DLX2Q07687 328 aaPredicted RBP8.14□□□□□ -1.11
USP54-215ENST00000497106 FLOT2Q14254 428 aa8.14□□□□□ -1.11
USP54-215ENST00000497106 MUM1Q2TAK8 710 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms