RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 SYVN1Q86TM6 617 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 TAX1BP1Q86VP1 789 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 PPIL6Q8IXY8 311 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 SYTL1Q8IYJ3 562 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 GPR135Q8IZ08 494 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 AGGF1Q8N302 714 aaeCLIP11.41□□□□□ -0.58
THBS3-208ENST00000496332 DNAJC22Q8N4W6 341 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 SEC14L1Q92503 715 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 RAD51AP1Q96B01 352 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 SLC22A18Q96BI1 424 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 ABHD17AQ96GS6 310 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 SIGLEC10Q96LC7 697 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 FOPNLQ96NB1 174 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 SPRTNQ9H040 489 aaPredicted RBP11.41□□□□□ -0.58
THBS3-208ENST00000496332 DDX47Q9H0S4 455 aaKnown RBP11.41□□□□□ -0.58
THBS3-208ENST00000496332 ZNF71Q9NQZ8 489 aaPredicted RBP11.41□□□□□ -0.58
THBS3-208ENST00000496332 INTS10Q9NVR2 710 aaKnown RBP11.41□□□□□ -0.58
THBS3-208ENST00000496332 GALPQ9UBC7 116 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 TSR3Q9UJK0 312 aaKnown RBP11.41□□□□□ -0.58
THBS3-208ENST00000496332 RUVBL2Q9Y230 463 aaKnown RBP11.41□□□□□ -0.58
THBS3-208ENST00000496332 VPS9D1Q9Y2B5 631 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 KLHL20Q9Y2M5 609 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 MRFAP1Q9Y605 127 aa11.41□□□□□ -0.58
THBS3-208ENST00000496332 COL6A6A6NMZ7 2263 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 CTAGE9A4FU28 777 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 H3BMH7 237 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 USP1O94782 785 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 CTSBP07858 339 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 F7P08709 466 aaPredicted RBP11.4□□□□□ -0.58
THBS3-208ENST00000496332 RAB40ALP0C0E4 278 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 MAGP20916 626 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 CCNFP41002 786 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 GNG11P61952 73 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 CTBP1Q13363 440 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 IL10RAQ13651 578 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 GBX1Q14549 363 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 SF1Q15637 639 aaKnown RBP11.4□□□□□ -0.58
THBS3-208ENST00000496332 UGT8Q16880 541 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 LONRF1Q17RB8 773 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 PTCHD3Q3KNS1 767 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 ACSBG2Q5FVE4 666 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 RNASEH2BQ5TBB1 312 aaKnown RBP11.4□□□□□ -0.58
THBS3-208ENST00000496332 PTRH1Q86Y79 214 aaKnown RBP11.4□□□□□ -0.58
THBS3-208ENST00000496332 DENND6AQ8IWF6 608 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 ZBTB2Q8N680 514 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 ENDOVQ8N8Q3 282 aaKnown RBP11.4□□□□□ -0.58
THBS3-208ENST00000496332 C9orf43Q8TAL5 461 aaPredicted RBP11.4□□□□□ -0.58
THBS3-208ENST00000496332 RAB11FIP5Q9BXF6 653 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 NLNQ9BYT8 704 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 FBXO6Q9NRD1 293 aaPredicted RBP11.4□□□□□ -0.58
THBS3-208ENST00000496332 C20orf96Q9NUD7 363 aaPredicted RBP11.4□□□□□ -0.58
THBS3-208ENST00000496332 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.4□□□□□ -0.58
THBS3-208ENST00000496332 ASIC3Q9UHC3 531 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 PLCL2Q9UPR0 1127 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 MAN2B2Q9Y2E5 1009 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 AP1M2Q9Y6Q5 423 aa11.4□□□□□ -0.58
THBS3-208ENST00000496332 TLN1Q9Y490 2541 aaKnown RBP11.4□□□□□ -0.59
THBS3-208ENST00000496332 TENM4Q6N022 2769 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 KRT87PA6NCN2 255 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 E5RI56 91 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 PYCARD-AS1I3L0S3 204 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 DNALI1O14645 258 aaPredicted RBP11.39□□□□□ -0.59
THBS3-208ENST00000496332 SUV39H1O43463 412 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 PRICKLE3O43900 615 aaPredicted RBP11.39□□□□□ -0.59
THBS3-208ENST00000496332 MATN4O95460 622 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 CAPN1P07384 714 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 CBSLP0DN79 551 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 AGXTP21549 392 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 ATP5DP30049 168 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 CBSP35520 551 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 SLC1A2P43004 574 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 CLCN7P51798 805 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 PTK6Q13882 451 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 C1orf189Q5VU69 101 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 FAM69BQ5VUD6 431 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 FCRL6Q6DN72 434 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 FAM198BQ6UWH4 519 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 ATG14Q6ZNE5 492 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 RAB42Q8N4Z0 105 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 MAGEC3Q8TD91 643 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 DENND1AQ8TEH3 1009 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 THAP4Q8WY91 577 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 PDLIM2Q96JY6 352 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 CAPZA3Q96KX2 299 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 DPH2Q9BQC3 489 aaPredicted RBP11.39□□□□□ -0.59
THBS3-208ENST00000496332 INTS7Q9NVH2 962 aaKnown RBP11.39□□□□□ -0.59
THBS3-208ENST00000496332 IRAK4Q9NWZ3 460 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 EURLQ9NYK6 297 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 TCFL5Q9UL49 500 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 SNX7Q9UNH6 387 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 FAM169AQ9Y6X4 670 aa11.39□□□□□ -0.59
THBS3-208ENST00000496332 C9J4A7 227 aa11.38□□□□□ -0.59
THBS3-208ENST00000496332 MKRN2OSH3BPM6 223 aa11.38□□□□□ -0.59
THBS3-208ENST00000496332 ZSCAN9O15535 394 aaPredicted RBP11.38□□□□□ -0.59
THBS3-208ENST00000496332 RFPL1O75677 317 aa11.38□□□□□ -0.59
THBS3-208ENST00000496332 PGAM1P18669 254 aa11.38□□□□□ -0.59
THBS3-208ENST00000496332 GRIA3P42263 894 aa11.38□□□□□ -0.59
THBS3-208ENST00000496332 PTGIRP43119 386 aa11.38□□□□□ -0.59
THBS3-208ENST00000496332 PMS2P54278 862 aa11.38□□□□□ -0.59
THBS3-208ENST00000496332 NCF4Q15080 339 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms