RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 TBC1D3GQ6DHY5 549 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 TBC1D3CQ6IPX1 549 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 UNC5DQ6UXZ4 953 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 ADGRG6Q86SQ4 1221 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 CFAP206Q8IYR0 622 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 TBC1D3Q8IZP1 549 aaPredicted RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 RAB42Q8N4Z0 105 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 BEND7Q8N7W2 519 aaPredicted RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 SNX31Q8N9S9 440 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 KYQ8NBH2 561 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 RBM15BQ8NDT2 890 aaKnown RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 OR14C36Q8NHC7 312 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 STMN2Q93045 179 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 TOE1Q96GM8 510 aaKnown RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 LENG8Q96PV6 779 aaPredicted RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 TPSD1Q9BZJ3 242 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 AKTIPQ9H8T0 292 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 ACTR8Q9H981 624 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 BAIAP2L1Q9UHR4 511 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 PRPF19Q9UMS4 504 aaKnown RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 G3BP2Q9UN86 482 aaKnown RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 DMTF1Q9Y222 760 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 COPG1Q9Y678 874 aaKnown RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 DOCK9Q9BZ29 2069 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 TOR1BO14657 336 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 TAPBPO15533 448 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 SPINT1O43278 529 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 HRO43593 1189 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 POP7O75817 140 aaKnown RBP9.99□□□□□ -0.81
HDAC3-214ENST00000495485 EPN2O95208 641 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 STAMBPO95630 424 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 CAPN1P07384 714 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 LINC00032P0C843 101 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 GNSP15586 552 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 GM2AP17900 193 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 KELP23276 732 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 MAPK1P28482 360 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 HSD17B2P37059 387 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 CPA2P48052 419 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 MRPL19P49406 292 aaKnown RBP9.99□□□□□ -0.81
HDAC3-214ENST00000495485 RAP1GDS1P52306 607 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 METAP1P53582 386 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 PNLIPRP1P54315 467 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 RPL6Q02878 288 aaKnown RBP9.99□□□□□ -0.81
HDAC3-214ENST00000495485 ABRQ12979 859 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 TRMT5Q32P41 509 aaKnown RBP9.99□□□□□ -0.81
HDAC3-214ENST00000495485 GGTA1PQ4G0N0 100 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 AGKQ53H12 422 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 C10orf62Q5T681 223 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-214ENST00000495485 PEAR1Q5VY43 1037 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-214ENST00000495485 IL27RAQ6UWB1 636 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 NET1Q7Z628 596 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-214ENST00000495485 AMZ2Q86W34 360 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 TRIM69Q86WT6 500 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 SNX32Q86XE0 403 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 GALNT13Q8IUC8 556 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 AADATQ8N5Z0 425 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 CDYL2Q8N8U2 506 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 SUMF1Q8NBK3 374 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 OR4F6Q8NGB9 312 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 DNASE2BQ8WZ79 361 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 CCDC97Q96F63 343 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-214ENST00000495485 PRR11Q96HE9 360 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-214ENST00000495485 COX14Q96I36 57 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 THTPAQ9BU02 230 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 C1QTNF2Q9BXJ5 285 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 CADM1Q9BY67 442 aaKnown RBP9.99□□□□□ -0.81
HDAC3-214ENST00000495485 SLC17A9Q9BYT1 436 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 ZNF385DQ9H6B1 395 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 WDR26Q9H7D7 661 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 GID8Q9NWU2 228 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 GPRC5BQ9NZH0 403 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 ATXN10Q9UBB4 475 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 ACSL5Q9ULC5 683 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 CNOT6Q9ULM6 557 aaKnown RBP9.99□□□□□ -0.81
HDAC3-214ENST00000495485 CYP8B1Q9UNU6 501 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 EIF3LQ9Y262 564 aaKnown RBP9.99□□□□□ -0.81
HDAC3-214ENST00000495485 NDUFAF1Q9Y375 327 aa9.99□□□□□ -0.81
HDAC3-214ENST00000495485 GOLGA4Q13439 2230 aaKnown RBP9.99□□□□□ -0.81
HDAC3-214ENST00000495485 CFAP54Q96N23 3096 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 SERTM1A2A2V5 107 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 ANTXRLA6NF34 631 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 METTL12A8MUP2 240 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 C10orf142B7Z368 130 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 CACNB4O00305 520 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-214ENST00000495485 PLK4O00444 970 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 OR7A17O14581 309 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 CHUKO15111 745 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 SGTAO43765 313 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 ATP6V1G2O95670 118 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 SOD1P00441 154 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 PCCBP05166 539 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 MYCLP1P12525 358 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-214ENST00000495485 PBLDP30039 288 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-214ENST00000495485 TRIM23P36406 574 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 HNF4AP41235 474 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 PXNP49023 591 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-214ENST00000495485 NUDT2P50583 147 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 CTSCP53634 463 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 ADPRHP54922 357 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms