RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 RPL9P32969 192 aaKnown RBP15□□□□□ -0.01
SDF4-207ENST00000494748 PPP3CCP48454 512 aa15□□□□□ -0.01
SDF4-207ENST00000494748 HMGCS1Q01581 520 aa15□□□□□ -0.01
SDF4-207ENST00000494748 USP39Q53GS9 565 aaKnown RBP15□□□□□ -0.01
SDF4-207ENST00000494748 ENTHD1Q8IYW4 607 aa15□□□□□ -0.01
SDF4-207ENST00000494748 TTC29Q8NA56 475 aaPredicted RBP15□□□□□ -0.01
SDF4-207ENST00000494748 RNF167Q9H6Y7 350 aa15□□□□□ -0.01
SDF4-207ENST00000494748 CCNB1IP1Q9NPC3 277 aa15□□□□□ -0.01
SDF4-207ENST00000494748 IL1RAPQ9NPH3 570 aa15□□□□□ -0.01
SDF4-207ENST00000494748 ASIC5Q9NY37 505 aa15□□□□□ -0.01
SDF4-207ENST00000494748 MAN2B2Q9Y2E5 1009 aa15□□□□□ -0.01
SDF4-207ENST00000494748 HAT1O14929 419 aa15□□□□□ -0.01
SDF4-207ENST00000494748 MAGP20916 626 aa15□□□□□ -0.01
SDF4-207ENST00000494748 CXCR2P25025 360 aa15□□□□□ -0.01
SDF4-207ENST00000494748 CDKN2CP42773 168 aa15□□□□□ -0.01
SDF4-207ENST00000494748 PIK3CGP48736 1102 aa15□□□□□ -0.01
SDF4-207ENST00000494748 PRKCDQ05655 676 aa15□□□□□ -0.01
SDF4-207ENST00000494748 CACNB2Q08289 660 aaPredicted RBP15□□□□□ -0.01
SDF4-207ENST00000494748 PTPRRQ15256 657 aa15□□□□□ -0.01
SDF4-207ENST00000494748 PROX2Q3B8N5 592 aa15□□□□□ -0.01
SDF4-207ENST00000494748 OR2T5Q6IEZ7 315 aa15□□□□□ -0.01
SDF4-207ENST00000494748 RNF165Q6ZSG1 346 aa15□□□□□ -0.01
SDF4-207ENST00000494748 AHSA2Q719I0 299 aa15□□□□□ -0.01
SDF4-207ENST00000494748 GPRC5AQ8NFJ5 357 aa15□□□□□ -0.01
SDF4-207ENST00000494748 OR2T29Q8NH02 315 aa15□□□□□ -0.01
SDF4-207ENST00000494748 ZMYM5Q9UJ78 669 aa15□□□□□ -0.01
SDF4-207ENST00000494748 EIF3LQ9Y262 564 aaKnown RBP15□□□□□ -0.01
SDF4-207ENST00000494748 NUP214P35658 2090 aaPredicted RBP14.99□□□□□ -0.01
SDF4-207ENST00000494748 GPR39O43194 453 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 HOXC11O43248 304 aaPredicted RBP14.99□□□□□ -0.01
SDF4-207ENST00000494748 RAMP2O60895 175 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 RECQL5O94762 991 aaPredicted RBP14.99□□□□□ -0.01
SDF4-207ENST00000494748 TBX4P57082 545 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 TAF1AQ15573 450 aaPredicted RBP14.99□□□□□ -0.01
SDF4-207ENST00000494748 IQCCQ4KMZ1 466 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 RAP1GAP2Q684P5 730 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 CCBE1Q6UXH8 406 aaPredicted RBP14.99□□□□□ -0.01
SDF4-207ENST00000494748 GLB1L3Q8NCI6 653 aaPredicted RBP14.99□□□□□ -0.01
SDF4-207ENST00000494748 KLHDC9Q8NEP7 349 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 KCNJ9Q92806 393 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 MGME1Q9BQP7 344 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 NACA2Q9H009 215 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 IPPKQ9H8X2 491 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 TM9SF3Q9HD45 589 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 ZNF106Q9H2Y7 1883 aaKnown RBP14.99□□□□□ -0.01
SDF4-207ENST00000494748 DIRAS1O95057 198 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 HOXC8P31273 242 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 SMU1Q2TAY7 513 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 SOWAHCQ53LP3 525 aaPredicted RBP14.99□□□□□ -0.01
SDF4-207ENST00000494748 FAHD1Q6P587 224 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 TRIM46Q7Z4K8 759 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 ELMOD1Q8N336 334 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 OR6F1Q8NGZ6 308 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 OR52E6Q96RD3 313 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 SH3GL1Q99961 368 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 P2RY12Q9H244 342 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 ITM2CQ9NQX7 267 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 RASSF1Q9NS23 344 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 PER2O15055 1255 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 NDUFB5O43674 189 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 AIREO43918 545 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 PARNO95453 639 aaKnown RBP14.99□□□□□ -0.01
SDF4-207ENST00000494748 SLC19A1P41440 591 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 VLDLRP98155 873 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 TPRG1LQ5T0D9 272 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 SDHAF4Q5VUM1 108 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 DPY30Q9C005 99 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 ZFP14Q9HCL3 533 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 FKBP14Q9NWM8 211 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 FKBPLQ9UIM3 349 aa14.99□□□□□ -0.01
SDF4-207ENST00000494748 HOXD9P28356 352 aaPredicted RBP14.98□□□□□ -0.01
SDF4-207ENST00000494748 GPR15P49685 360 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 PSEN2P49810 448 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 COPZ1P61923 177 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 KIAA1614Q5VZ46 1190 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 GLT6D1Q7Z4J2 308 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 CLHC1Q8NHS4 586 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 IPCEF1Q8WWN9 437 aaPredicted RBP14.98□□□□□ -0.01
SDF4-207ENST00000494748 PROX1Q92786 737 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 APOL4Q9BPW4 351 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 ABHD16BQ9H3Z7 469 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 NSUN3Q9H649 340 aaKnown RBP14.98□□□□□ -0.01
SDF4-207ENST00000494748 RNF6Q9Y252 685 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 DOCK3Q8IZD9 2030 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 A0A096LPI6 279 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 PGLSO95336 258 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 OR4Q2P0C623 313 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 C21orf33P30042 268 aaPredicted RBP14.98□□□□□ -0.01
SDF4-207ENST00000494748 ETV6P41212 452 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 CLCN4P51793 760 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 SLC46A3Q7Z3Q1 461 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 CARNMT1Q8N4J0 409 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 HHIPQ96QV1 700 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 TINF2Q9BSI4 451 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 KCNH6Q9H252 994 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 SCML2Q9UQR0 700 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 PCDHGA6Q9Y5G7 932 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 PCDHGA3Q9Y5H0 932 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 N6AMT1Q9Y5N5 214 aa14.98□□□□□ -0.01
SDF4-207ENST00000494748 FFAR3O14843 346 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms